318 update for tes compliance #1025
GitHub Actions / JUnit Test Report
failed
Sep 16, 2024 in 0s
2 tests run, 0 passed, 0 skipped, 2 failed.
Annotations
Check failure on line 1 in Test Process SRATOOLS_FASTERQDUMP
github-actions / JUnit Test Report
Test Process SRATOOLS_FASTERQDUMP.Single-end
Assertion failed:
1 of 2 assertions failed
Raw output
Nextflow stdout:
N E X T F L O W ~ version 23.04.5
Launching `/home/runner/work/fetchngs/fetchngs/.nf-test-b341db190724a4a54249d2821a1053eb.nf` [irreverent_avogadro] DSL2 - revision: 93c80db4de
Downloading plugin [email protected]
Downloading plugin [email protected]
[f8/e72680] Submitted process > UNTAR (SRR13255544.tar.gz)
[be/491b43] Submitted process > SRATOOLS_FASTERQDUMP (test_single_end)
Nextflow stderr:
Check failure on line 1 in Test Process SRATOOLS_FASTERQDUMP
github-actions / JUnit Test Report
Test Process SRATOOLS_FASTERQDUMP.Paired-end
Assertion failed:
1 of 2 assertions failed
Raw output
Nextflow stdout:
N E X T F L O W ~ version 23.04.5
Launching `/home/runner/work/fetchngs/fetchngs/.nf-test-d51f7c9e710f09906b7fc40935dce6f6.nf` [drunk_aryabhata] DSL2 - revision: 1ba0b2e484
Staging foreign file: s3://ngi-igenomes/testdata/nf-core/modules/genomics/sarscov2/illumina/sra/SRR11140744.tar.gz
[9e/2448ba] Submitted process > UNTAR (SRR11140744.tar.gz)
[3b/e648a4] Submitted process > SRATOOLS_FASTERQDUMP (test_paired_end)
Nextflow stderr:
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