318 update for tes compliance #1025
GitHub Actions / JUnit Test Report
failed
Sep 16, 2024 in 0s
1 tests run, 0 passed, 0 skipped, 1 failed.
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github-actions / JUnit Test Report
nf.Parameters: --download_method sratools
Assertion failed:
1 of 3 assertions failed
Raw output
Nextflow stdout:
N E X T F L O W ~ version 23.04.5
Launching `/home/runner/work/fetchngs/fetchngs/.nf-test-775fab53cb4a02a15d51ffbf8d902e18.nf` [small_moriondo] DSL2 - revision: 68dcf2aadf
Downloading plugin [email protected]
[bc/89bf93] Submitted process > SRA:SRA_IDS_TO_RUNINFO (DRX026011)
[12/543ce4] Submitted process > SRA:SRA_IDS_TO_RUNINFO (ERX1234253)
[e5/526c52] Submitted process > SRA:SRA_IDS_TO_RUNINFO (SRX6725035)
[3a/bf8291] Submitted process > SRA:SRA_RUNINFO_TO_FTP (1)
[49/be826c] Submitted process > SRA:SRA_RUNINFO_TO_FTP (2)
[fe/1fb179] Submitted process > SRA:SRA_RUNINFO_TO_FTP (3)
[d1/70347a] Submitted process > SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:CUSTOM_SRATOOLSNCBISETTINGS (ncbi-settings)
[70/d0b16a] Submitted process > SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (DRR028935)
[f6/22efc7] Submitted process > SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR9984183)
[dd/082492] Submitted process > SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (ERR1160846)
[05/1d7517] Submitted process > SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (DRX026011_DRR028935)
[bc/1a65ae] Submitted process > SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX6725035_SRR9984183)
[29/6152d9] Submitted process > SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (ERX1234253_ERR1160846)
[60/fd0c61] Submitted process > SRA:SRA_TO_SAMPLESHEET (DRX026011_DRR028935)
[94/fc417a] Submitted process > SRA:SRA_TO_SAMPLESHEET (SRX6725035_SRR9984183)
[c9/eb4daf] Submitted process > SRA:SRA_TO_SAMPLESHEET (ERX1234253_ERR1160846)
[41/1fa598] Submitted process > SRA:MULTIQC_MAPPINGS_CONFIG (1)
Nextflow stderr:
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