318 update some modeles for tes compliance #1018
GitHub Actions / JUnit Test Report
failed
Sep 16, 2024 in 0s
1 tests run, 0 passed, 0 skipped, 1 failed.
Annotations
github-actions / JUnit Test Report
nf.Parameters: --nf_core_pipeline taxprofiler
Assertion failed:
1 of 3 assertions failed
Raw output
Nextflow stdout:
N E X T F L O W ~ version 24.08.0-edge
Launching `/home/runner/work/fetchngs/fetchngs/.nf-test-9e1b6d5563ebb0aa07d6d5a25e02e8c1.nf` [desperate_leibniz] DSL2 - revision: 68dcf2aadf
Downloading plugin [email protected]
[21/3bfc2a] Submitted process > SRA:SRA_IDS_TO_RUNINFO (SRX6725035)
[62/8c8dd0] Submitted process > SRA:SRA_IDS_TO_RUNINFO (DRX026011)
[56/0f3dbc] Submitted process > SRA:SRA_IDS_TO_RUNINFO (ERX1234253)
[25/352a9c] Submitted process > SRA:SRA_RUNINFO_TO_FTP (1)
WARN: Process `SRA:SRA_RUNINFO_TO_FTP` publishDir path contains a variable with a null value
[09/329faa] Submitted process > SRA:SRA_RUNINFO_TO_FTP (2)
WARN: Process `SRA:SRA_RUNINFO_TO_FTP` publishDir path contains a variable with a null value
[64/419607] Submitted process > SRA:SRA_FASTQ_FTP (SRX6725035_SRR9984183)
[8f/c67789] Submitted process > SRA:SRA_FASTQ_FTP (DRX026011_DRR028935)
[54/4e85e3] Submitted process > SRA:SRA_RUNINFO_TO_FTP (3)
WARN: Process `SRA:SRA_FASTQ_FTP` publishDir path contains a variable with a null value
WARN: Process `SRA:SRA_FASTQ_FTP` publishDir path contains a variable with a null value
[42/3bd8db] Submitted process > SRA:SRA_TO_SAMPLESHEET (DRX026011_DRR028935)
WARN: Process `SRA:SRA_FASTQ_FTP` publishDir path contains a variable with a null value
WARN: Process `SRA:SRA_FASTQ_FTP` publishDir path contains a variable with a null value
[e0/f2e574] Submitted process > SRA:SRA_TO_SAMPLESHEET (SRX6725035_SRR9984183)
WARN: Process `SRA:SRA_RUNINFO_TO_FTP` publishDir path contains a variable with a null value
[64/9347db] Submitted process > SRA:SRA_FASTQ_FTP (ERX1234253_ERR1160846)
WARN: Process `SRA:SRA_FASTQ_FTP` publishDir path contains a variable with a null value
WARN: Process `SRA:SRA_FASTQ_FTP` publishDir path contains a variable with a null value
[5a/b37d72] Submitted process > SRA:SRA_TO_SAMPLESHEET (ERX1234253_ERR1160846)
[90/84787a] Submitted process > SRA:MULTIQC_MAPPINGS_CONFIG (1)
WARN: Process `SRA:MULTIQC_MAPPINGS_CONFIG` publishDir path contains a variable with a null value
Nextflow stderr:
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