Skip to content

318 update some modeles for tes compliance #1016

318 update some modeles for tes compliance

318 update some modeles for tes compliance #1016

GitHub Actions / JUnit Test Report failed Sep 16, 2024 in 0s

1 tests run, 0 passed, 0 skipped, 1 failed.

Annotations

Check failure on line 1 in nf

See this annotation in the file changed.

@github-actions github-actions / JUnit Test Report

nf.Parameters: --download_method sratools

Assertion failed: 

1 of 3 assertions failed
Raw output
Nextflow stdout:

N E X T F L O W  ~  version 23.04.5
Launching `/home/runner/work/fetchngs/fetchngs/.nf-test-775fab53cb4a02a15d51ffbf8d902e18.nf` [nice_waddington] DSL2 - revision: 68dcf2aadf
Downloading plugin [email protected]
[73/9071f3] Submitted process > SRA:SRA_IDS_TO_RUNINFO (DRX026011)
[b4/ccbf41] Submitted process > SRA:SRA_IDS_TO_RUNINFO (ERX1234253)
[e0/7153c1] Submitted process > SRA:SRA_IDS_TO_RUNINFO (SRX6725035)
[10/1e705e] Submitted process > SRA:SRA_RUNINFO_TO_FTP (1)
[78/e67b53] Submitted process > SRA:SRA_RUNINFO_TO_FTP (2)
[11/99826d] Submitted process > SRA:SRA_RUNINFO_TO_FTP (3)
[fa/34c892] Submitted process > SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:CUSTOM_SRATOOLSNCBISETTINGS (ncbi-settings)
[c7/38169f] Submitted process > SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (DRR028935)
[ca/91303b] Submitted process > SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (SRR9984183)
[53/e2dd21] Submitted process > SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_PREFETCH (ERR1160846)
[52/640b5c] Submitted process > SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (DRX026011_DRR028935)
[ff/ce7b85] Submitted process > SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (SRX6725035_SRR9984183)
[ae/7e2a1d] Submitted process > SRA:FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS:SRATOOLS_FASTERQDUMP (ERX1234253_ERR1160846)
[ba/d89b94] Submitted process > SRA:SRA_TO_SAMPLESHEET (DRX026011_DRR028935)
[03/ff52e2] Submitted process > SRA:SRA_TO_SAMPLESHEET (SRX6725035_SRR9984183)
[6d/926738] Submitted process > SRA:SRA_TO_SAMPLESHEET (ERX1234253_ERR1160846)
[e4/eb1d5c] Submitted process > SRA:MULTIQC_MAPPINGS_CONFIG (1)
Nextflow stderr: