318 update some modeles for tes compliance #1016
GitHub Actions / JUnit Test Report
failed
Sep 16, 2024 in 0s
1 tests run, 0 passed, 0 skipped, 1 failed.
Annotations
github-actions / JUnit Test Report
nf.Parameters: --nf_core_pipeline rnaseq
Assertion failed:
1 of 3 assertions failed
Raw output
Nextflow stdout:
N E X T F L O W ~ version 24.08.0-edge
Launching `/home/runner/work/fetchngs/fetchngs/.nf-test-47ba6ce2b9d272e12d6a519c81aeca6a.nf` [fabulous_sanger] DSL2 - revision: 68dcf2aadf
Downloading plugin [email protected]
[44/f0cefe] Submitted process > SRA:SRA_IDS_TO_RUNINFO (DRX026011)
[eb/863935] Submitted process > SRA:SRA_IDS_TO_RUNINFO (SRX6725035)
[fb/08ea22] Submitted process > SRA:SRA_IDS_TO_RUNINFO (ERX1234253)
[41/ca593c] Submitted process > SRA:SRA_RUNINFO_TO_FTP (1)
WARN: Process `SRA:SRA_RUNINFO_TO_FTP` publishDir path contains a variable with a null value
[23/6dc904] Submitted process > SRA:SRA_RUNINFO_TO_FTP (2)
WARN: Process `SRA:SRA_RUNINFO_TO_FTP` publishDir path contains a variable with a null value
[60/9e7e2f] Submitted process > SRA:SRA_FASTQ_FTP (SRX6725035_SRR9984183)
[bc/0e9996] Submitted process > SRA:SRA_FASTQ_FTP (DRX026011_DRR028935)
[1d/42bff2] Submitted process > SRA:SRA_RUNINFO_TO_FTP (3)
WARN: Process `SRA:SRA_FASTQ_FTP` publishDir path contains a variable with a null value
WARN: Process `SRA:SRA_FASTQ_FTP` publishDir path contains a variable with a null value
[99/743597] Submitted process > SRA:SRA_TO_SAMPLESHEET (DRX026011_DRR028935)
WARN: Process `SRA:SRA_FASTQ_FTP` publishDir path contains a variable with a null value
WARN: Process `SRA:SRA_FASTQ_FTP` publishDir path contains a variable with a null value
[c7/4c5d26] Submitted process > SRA:SRA_TO_SAMPLESHEET (SRX6725035_SRR9984183)
WARN: Process `SRA:SRA_RUNINFO_TO_FTP` publishDir path contains a variable with a null value
[d9/03aa9a] Submitted process > SRA:SRA_FASTQ_FTP (ERX1234253_ERR1160846)
WARN: Process `SRA:SRA_FASTQ_FTP` publishDir path contains a variable with a null value
WARN: Process `SRA:SRA_FASTQ_FTP` publishDir path contains a variable with a null value
[c3/b9bc24] Submitted process > SRA:SRA_TO_SAMPLESHEET (ERX1234253_ERR1160846)
[2c/d9f31e] Submitted process > SRA:MULTIQC_MAPPINGS_CONFIG (1)
WARN: Process `SRA:MULTIQC_MAPPINGS_CONFIG` publishDir path contains a variable with a null value
Nextflow stderr:
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