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Merge branch 'pf' with channel for python 3.5 specified #1

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Merge branch 'pf' with channel for python 3.5 specified

Merge branch 'pf' with channel for python 3.5 specified #1

Run time

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Job Run time
prettier
28s
nf-test-changes
5s
editorconfig
12s
pytest-changes
4s
nf-core-lint (bases2fastq)
1m 0s
nf-core-lint (basicpy)
48s
nf-core-lint (bcl2fastq)
53s
nf-core-lint (bclconvert)
54s
nf-core-lint (cellpose)
1m 7s
nf-core-lint (cellranger/count)
45s
nf-core-lint (cellranger/mkfastq)
57s
nf-core-lint (cellranger/mkgtf)
53s
nf-core-lint (cellranger/mkref)
1m 8s
nf-core-lint (cellranger/mkvdjref)
1m 5s
nf-core-lint (cellranger/multi)
46s
nf-core-lint (cellranger/vdj)
1m 6s
nf-core-lint (deepvariant)
1m 1s
nf-core-lint (fastk/fastk)
1m 1s
nf-core-lint (fastk/histex)
45s
nf-core-lint (kmcp/compute)
47s
nf-core-lint (kmcp/profile)
1m 4s
nf-core-lint (kmcp/search)
47s
nf-core-lint (plasflow)
53s
nf-core-lint (sentieon/applyvarcal)
1m 4s
nf-core-lint (sentieon/bwaindex)
46s
nf-core-lint (sentieon/bwamem)
49s
nf-core-lint (sentieon/dedup)
1m 6s
nf-core-lint (sentieon/gvcftyper)
49s
nf-core-lint (sentieon/haplotyper)
1m 9s
nf-core-lint (sentieon/varcal)
1m 8s
nf-core-lint (seqkit/fx2tab)
50s
nf-core-lint (snakemake)
1m 15s
pytest (bases2fastq, docker)
1m 17s
pytest (bases2fastq, singularity)
1m 56s
pytest (basicpy, docker)
1m 46s
pytest (basicpy, singularity)
1m 56s
pytest (bcl2fastq, docker)
2s
pytest (bcl2fastq, singularity)
1s
pytest (bclconvert, docker)
1s
pytest (bclconvert, singularity)
1s
pytest (cellpose, docker)
1s
pytest (cellpose, singularity)
1s
pytest (cellranger/count, docker)
1s
pytest (cellranger/count, singularity)
1s
pytest (cellranger/mkfastq, docker)
1s
pytest (cellranger/mkfastq, singularity)
1s
pytest (cellranger/mkgtf, docker)
1s
pytest (cellranger/mkgtf, singularity)
1s
pytest (cellranger/mkref, docker)
1s
pytest (cellranger/mkref, singularity)
1s
pytest (cellranger/mkvdjref, docker)
1s
pytest (cellranger/mkvdjref, singularity)
1s
pytest (cellranger/multi, docker)
1s
pytest (cellranger/multi, singularity)
1s
pytest (cellranger/vdj, docker)
1s
pytest (cellranger/vdj, singularity)
1s
pytest (deepvariant, docker)
1s
pytest (deepvariant, singularity)
1s
pytest (fastk/fastk, docker)
1s
pytest (fastk/fastk, singularity)
1s
pytest (fastk/histex, docker)
1s
pytest (fastk/histex, singularity)
1s
pytest (kmcp/compute, docker)
1s
pytest (kmcp/compute, singularity)
1s
pytest (kmcp/compute, conda)
1s
pytest (kmcp/profile, docker)
1s
pytest (kmcp/profile, singularity)
1s
pytest (kmcp/profile, conda)
1s
pytest (kmcp/search, docker)
1s
pytest (kmcp/search, singularity)
1s
pytest (kmcp/search, conda)
1s
pytest (plasflow, docker)
1s
pytest (plasflow, singularity)
1s
pytest (plasflow, conda)
1s
pytest (sentieon/applyvarcal, docker)
1s
pytest (sentieon/applyvarcal, singularity)
1s
pytest (sentieon/bwaindex, docker)
1s
pytest (sentieon/bwaindex, singularity)
1s
pytest (sentieon/bwamem, docker)
1s
pytest (sentieon/bwamem, singularity)
1s
pytest (sentieon/dedup, docker)
1s
pytest (sentieon/dedup, singularity)
1s
pytest (sentieon/gvcftyper, docker)
1s
pytest (sentieon/gvcftyper, singularity)
1s
pytest (sentieon/haplotyper, docker)
1s
pytest (sentieon/haplotyper, singularity)
1s
pytest (sentieon/varcal, docker)
1s
pytest (sentieon/varcal, singularity)
1s
pytest (seqkit/fx2tab, docker)
1s
pytest (seqkit/fx2tab, singularity)
1s
pytest (seqkit/fx2tab, conda)
1s
pytest (snakemake, docker)
1s
pytest (snakemake, singularity)
1s
pytest (snakemake, conda)
1s
nf-test (snakemake, docker)
1s
nf-test (snakemake, singularity)
1s
nf-test (snakemake, conda)
1s
confirm-pass
1s
35m 23s