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387 Open 787 Closed
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Issues list

lofreq_call error log collection fails
#6394 opened Oct 1, 2024 by natefoo
1
IUC tool or not?
#6388 opened Oct 1, 2024 by nomadscientist
6
Autoupdate errors
#6385 opened Sep 30, 2024 by gxydevbot
1
Autoupdate errors
#6382 opened Sep 30, 2024 by gxydevbot
Autoupdate errors
#6373 opened Sep 26, 2024 by gxydevbot
gtdbtk databases question [help wanted]
#6359 opened Sep 26, 2024 by cat-bro
1
EMBOSS programs no graphic output
#6351 opened Sep 25, 2024 by H1889
Request: Make MultiQC 1.24.1+galaxy0 custom parsing backwards compatible with 1.11+galaxy1
#6335 opened Sep 16, 2024 by jennaj
JupyLab Tool Issues
#6326 opened Sep 13, 2024 by nomadscientist
2
Request: add in option to write out headers in dnadiff outputs
#6325 opened Sep 12, 2024 by jennaj
Request: add more to the Help section for dnadiff
#6319 opened Sep 10, 2024 by jennaj
Bug with gffread: converting gff3 to gtf results in transcript lines missing the final ;
#6310 opened Sep 6, 2024 by jennaj
ToolTemplatingException: Error occurred while building config files for tool 'scanpy_plot/1.9.6+galaxy4' affects UseGalaxy.* kind/bug
#6302 opened Sep 4, 2024 by galaxyproject-sentryintegration bot
1
trinity_align_and_estimate_abundance tool dependency issue
#6298 opened Sep 4, 2024 by sanjaysrikakulam
tracegroomer: output options & citation
#6294 opened Sep 3, 2024 by johaGL
5 tasks done
1
gProfiler tool update
#6286 opened Aug 29, 2024 by Mennayousef
2
-z parameter in RAxML, or new tool request: RAxML-NG
#6230 opened Aug 12, 2024 by Hymenium
Tool Request: Single cell tool request
#6219 opened Aug 9, 2024 by nomadscientist
1
Table Compute: Wanted Features
#6201 opened Aug 2, 2024 by mtekman
4 tasks
4
BUSCO default parameter not handled accurately
#6200 opened Aug 1, 2024 by SaimMomin12
fasterq_dump misses the clip option
#6171 opened Jul 23, 2024 by paulzierep
2
Diamond: optional outputs produced do not respect tool form settings
#6170 opened Jul 22, 2024 by jennaj
1
@bgruening
Tool Request: HERRO tool request
#6166 opened Jul 21, 2024 by jessemartin132
Update kraken-related tools to enable use of both Kraken and Kraken2 indexes
#6160 opened Jul 17, 2024 by jennaj
2 tasks
1
Idea: Add test cases to DMs that checks if all remote urls exist
#6151 opened Jul 15, 2024 by paulzierep
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