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117 Open 49 Closed
117 Open 49 Closed
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Issues list

What are TaxReads for Root?
#188 opened Oct 10, 2024 by peradastra
MicrobialDB does not include Human?
#187 opened Oct 2, 2024 by rbtoscan
Selective k-mer generation?
#186 opened Sep 25, 2024 by apredeus
3
About reference DB
#184 opened Sep 12, 2024 by km-2021
1
build_db.sh aborted
#183 opened Sep 11, 2024 by henr2934
Consistent False Positives in Respiratory Metagenome Analysis Using KrakenUniq with the MicrobialDB Database
#182 opened Sep 6, 2024 by TLH297
1
Inquiry Regarding KrakenUniq Database Construction Error（about step 4&6）
#181 opened Aug 24, 2024 by tinicc77
krakenuniq-translate results variable for taxonomy code 1 ("root")
#180 opened Aug 7, 2024 by jamieOverbeek
krakenuniq build (with eukaryotes) errors
#179 opened Aug 6, 2024 by mariafpv
Support for interleaved paired-end FASTQs
#178 opened Jul 11, 2024 by hermidalc
keep database in RAM and debug
#177 opened Jul 2, 2024 by DocAndymomo
Number of unique k-mers
#176 opened Jul 1, 2024 by BrinthaVP
Which files could be deleted after building database?
#175 opened Jun 25, 2024 by BhawnaY16
krakenuniq-download is stochastic
#174 opened Jun 5, 2024 by xapple
out of memory with --preload-size 80GB at 128GB
#171 opened May 16, 2024 by JochenSchaefergmxde
5
krakenuniq-extract-reads error
#168 opened Apr 3, 2024 by km-2021
3
Viral neighbors download (Died)
#167 opened Mar 21, 2024 by jalalsiddiqui
2
Mapping errors when downloading files
#166 opened Mar 19, 2024 by jalalsiddiqui
Trouble downloading viral neighbors database
#165 opened Mar 18, 2024 by jalalsiddiqui
2
krakenuniq-build error and krakenuniq results are unclassified
#164 opened Feb 29, 2024 by QuietgraceH
Clarification on hierarchical read classification with multiple databases
#161 opened Jan 10, 2024 by gtonkinhill
2
Can't use k of 39 (must be <= 31)
#160 opened Jan 9, 2024 by ailtonpcf
1
Metagenomic software solving similar problems as krakenUniq
#159 opened Dec 23, 2023 by pfeiferd
A very long runnig time for krakenuniq
#158 opened Dec 11, 2023 by Sheerlik
4
preload-size error exits with code 0
#156 opened Dec 6, 2023 by jvolkening
ProTip! no:milestone will show everything without a milestone.