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I was downloading sequences from viral-neighbors and get errors like below: Downloading sequences 90001 to 100000 of 188678 ...https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=nuccore&db=taxonomy&id=HM104174 HM104174: 239365 [/tmp/*]
No mapping for sequence HM104174 - not writing it to it's own file! https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=nuccore&db=taxonomy&id=KU258880 KU258880: 239365 [/tmp/*]
No mapping for sequence KU258880 - not writing it to it's own file! https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=nuccore&db=taxonomy&id=KU258879 KU258879: 239365 [/tmp/*]
No mapping for sequence KU258879 - not writing it to it's own file! https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=nuccore&db=taxonomy&id=KU258878 KU258878: 239365 [/tmp/*]
No mapping for sequence KU258878 - not writing it to it's own file! https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=nuccore&db=taxonomy&id=KU258877 KU258877: 239365 [/tmp/*]
No mapping for sequence KU258877 - not writing it to it's own file! https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=nuccore&db=taxonomy&id=KU258876 KU258876: 239365 [/tmp/*]
No mapping for sequence KU258876 - not writing it to it's own file! https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=nuccore&db=taxonomy&id=KU258875 KU258875: 239365 [/tmp/*]
No mapping for sequence KU258875 - not writing it to it's own file! https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=nuccore&db=taxonomy&id=KU258874 KU258874: 239365 [/tmp/*
No mapping for sequence KU258874 - not writing it to it's own file! https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=nuccore&db=taxonomy&id=KU258873 KU258873: 239365 [/tmp/*]
No mapping for sequence KU258873 - not writing it to it's own file! https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=nuccore&db=taxonomy&id=KU258872 KU258872: 239365 [/tmp/*]
No mapping for sequence KU258872 - not writing it to it's own file! https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=nuccore&db=taxonomy&id=KU258871 KU258871: 239365 [/tmp/*]
No mapping for sequence KU258871 - not writing it to it's own file! https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=nuccore&db=taxonomy&id=KU258870 KU258870: 239365 [/tmp/*]
No mapping for sequence KU258870 - not writing it to it's own file! https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=nuccore&db=taxonomy&id=KU179192 KU179192: 239365 [/tmp/*]
No mapping for sequence KU179192 - not writing it to it's own file! done
Does that mean that those sequences are not written? I think the taxa IDs are wrong and we can fix that manually.
Any help will be appreciated.
Thanks.
The text was updated successfully, but these errors were encountered:
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I was downloading sequences from viral-neighbors and get errors like below:
Downloading sequences 90001 to 100000 of 188678 ...https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=nuccore&db=taxonomy&id=HM104174
HM104174: 239365 [/tmp/*]
No mapping for sequence HM104174 - not writing it to it's own file!
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=nuccore&db=taxonomy&id=KU258880
KU258880: 239365 [/tmp/*]
No mapping for sequence KU258880 - not writing it to it's own file!
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=nuccore&db=taxonomy&id=KU258879
KU258879: 239365 [/tmp/*]
No mapping for sequence KU258879 - not writing it to it's own file!
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=nuccore&db=taxonomy&id=KU258878
KU258878: 239365 [/tmp/*]
No mapping for sequence KU258878 - not writing it to it's own file!
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=nuccore&db=taxonomy&id=KU258877
KU258877: 239365 [/tmp/*]
No mapping for sequence KU258877 - not writing it to it's own file!
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=nuccore&db=taxonomy&id=KU258876
KU258876: 239365 [/tmp/*]
No mapping for sequence KU258876 - not writing it to it's own file!
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=nuccore&db=taxonomy&id=KU258875
KU258875: 239365 [/tmp/*]
No mapping for sequence KU258875 - not writing it to it's own file!
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=nuccore&db=taxonomy&id=KU258874
KU258874: 239365 [/tmp/*
No mapping for sequence KU258874 - not writing it to it's own file!
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=nuccore&db=taxonomy&id=KU258873
KU258873: 239365 [/tmp/*]
No mapping for sequence KU258873 - not writing it to it's own file!
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=nuccore&db=taxonomy&id=KU258872
KU258872: 239365 [/tmp/*]
No mapping for sequence KU258872 - not writing it to it's own file!
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=nuccore&db=taxonomy&id=KU258871
KU258871: 239365 [/tmp/*]
No mapping for sequence KU258871 - not writing it to it's own file!
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=nuccore&db=taxonomy&id=KU258870
KU258870: 239365 [/tmp/*]
No mapping for sequence KU258870 - not writing it to it's own file!
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=nuccore&db=taxonomy&id=KU179192
KU179192: 239365 [/tmp/*]
No mapping for sequence KU179192 - not writing it to it's own file!
done
Does that mean that those sequences are not written? I think the taxa IDs are wrong and we can fix that manually.
Any help will be appreciated.
Thanks.
The text was updated successfully, but these errors were encountered: