add external pressure #168
Annotations
10 errors and 1 warning
|
../../../.julia/packages/Documenter/nQAq5/src/utilities/utilities.jl#L44
failed to run `@example` block in src/examples/BjordalsbakkeModel.md:130-135
```@example BjordalsbakkeModel
@nAmed Rs = Resistor(R=R_s)
@nAmed Csa = Compliance(C=C_sa)
@nAmed Csv = Compliance(C=C_sv, inV=true)
```
exception =
MethodError: no method matching Compliance(; inV::Bool, name::Symbol, C::Float64)
Closest candidates are:
Compliance(; name, V₀, C, inP, has_ep, has_variable_ep, p₀) got unsupported keyword argument "inV"
@ CirculatorySystemModels ~/.julia/packages/ModelingToolkit/66mEN/src/systems/abstractsystem.jl:1167
Stacktrace:
[1] kwerr(kw::NamedTuple{(:inV, :name, :C), Tuple{Bool, Symbol, Float64}}, args::Function)
@ Base ./error.jl:165
[2] top-level scope
@ ~/.julia/packages/ModelingToolkit/66mEN/src/systems/abstractsystem.jl:1003
[3] eval
@ ./boot.jl:370 [inlined]
[4] #54
@ ~/.julia/packages/Documenter/nQAq5/src/expander_pipeline.jl:738 [inlined]
[5] cd(f::Documenter.var"#54#56"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[6] (::Documenter.var"#53#55"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/nQAq5/src/expander_pipeline.jl:737
[7] (::IOCapture.var"#3#5"{DataType, Documenter.var"#53#55"{Documenter.Page, Module, Expr}, Task, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})()
@ IOCapture ~/.julia/packages/IOCapture/8Uj7o/src/IOCapture.jl:119
[8] with_logstate(f::Function, logstate::Any)
@ Base.CoreLogging ./logging.jl:514
[9] with_logger
@ ./logging.jl:626 [inlined]
[10] capture(f::Documenter.var"#53#55"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool)
@ IOCapture ~/.julia/packages/IOCapture/8Uj7o/src/IOCapture.jl:116
[11] runner(#unused#::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/nQAq5/src/expander_pipeline.jl:736
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../../../.julia/packages/Documenter/nQAq5/src/utilities/utilities.jl#L44
failed to run `@example` block in src/examples/BjordalsbakkeModel.md:148-157
```@example BjordalsbakkeModel
circ_eqs = [
connect(LV.out, AV.in)
connect(AV.out, Csa.in)
connect(Csa.out, Rs.in)
connect(Rs.out, Csv.in)
connect(Csv.out, MV.in)
connect(MV.out, LV.in)
]
```
exception =
UndefVarError: `Csv` not defined
Stacktrace:
[1] top-level scope
@ BjordalsbakkeModel.md:149
[2] eval
@ ./boot.jl:370 [inlined]
[3] #54
@ ~/.julia/packages/Documenter/nQAq5/src/expander_pipeline.jl:738 [inlined]
[4] cd(f::Documenter.var"#54#56"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[5] (::Documenter.var"#53#55"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/nQAq5/src/expander_pipeline.jl:737
[6] (::IOCapture.var"#3#5"{DataType, Documenter.var"#53#55"{Documenter.Page, Module, Expr}, Task, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})()
@ IOCapture ~/.julia/packages/IOCapture/8Uj7o/src/IOCapture.jl:119
[7] with_logstate(f::Function, logstate::Any)
@ Base.CoreLogging ./logging.jl:514
[8] with_logger
@ ./logging.jl:626 [inlined]
[9] capture(f::Documenter.var"#53#55"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool)
@ IOCapture ~/.julia/packages/IOCapture/8Uj7o/src/IOCapture.jl:116
[10] runner(#unused#::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/nQAq5/src/expander_pipeline.jl:736
|
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../../../.julia/packages/Documenter/nQAq5/src/utilities/utilities.jl#L44
failed to run `@example` block in src/examples/BjordalsbakkeModel.md:165-170
```@example BjordalsbakkeModel
@nAmed _circ_model = ODESystem(circ_eqs, t)
@nAmed circ_model = compose(_circ_model,
[LV, AV, MV, Rs, Csa, Csv])
```
exception =
UndefVarError: `circ_eqs` not defined
Stacktrace:
[1] top-level scope
@ ~/.julia/packages/ModelingToolkit/66mEN/src/systems/abstractsystem.jl:1003
[2] eval
@ ./boot.jl:370 [inlined]
[3] #54
@ ~/.julia/packages/Documenter/nQAq5/src/expander_pipeline.jl:738 [inlined]
[4] cd(f::Documenter.var"#54#56"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[5] (::Documenter.var"#53#55"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/nQAq5/src/expander_pipeline.jl:737
[6] (::IOCapture.var"#3#5"{DataType, Documenter.var"#53#55"{Documenter.Page, Module, Expr}, Task, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})()
@ IOCapture ~/.julia/packages/IOCapture/8Uj7o/src/IOCapture.jl:119
[7] with_logstate(f::Function, logstate::Any)
@ Base.CoreLogging ./logging.jl:514
[8] with_logger
@ ./logging.jl:626 [inlined]
[9] capture(f::Documenter.var"#53#55"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool)
@ IOCapture ~/.julia/packages/IOCapture/8Uj7o/src/IOCapture.jl:116
[10] runner(#unused#::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/nQAq5/src/expander_pipeline.jl:736
|
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../../../.julia/packages/Documenter/nQAq5/src/utilities/utilities.jl#L44
failed to run `@example` block in src/examples/BjordalsbakkeModel.md:176-178
```@example BjordalsbakkeModel
circ_sys = structural_simplify(circ_model)
```
exception =
UndefVarError: `circ_model` not defined
Stacktrace:
[1] top-level scope
@ BjordalsbakkeModel.md:177
[2] eval
@ ./boot.jl:370 [inlined]
[3] #54
@ ~/.julia/packages/Documenter/nQAq5/src/expander_pipeline.jl:738 [inlined]
[4] cd(f::Documenter.var"#54#56"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[5] (::Documenter.var"#53#55"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/nQAq5/src/expander_pipeline.jl:737
[6] (::IOCapture.var"#3#5"{DataType, Documenter.var"#53#55"{Documenter.Page, Module, Expr}, Task, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})()
@ IOCapture ~/.julia/packages/IOCapture/8Uj7o/src/IOCapture.jl:119
[7] with_logstate(f::Function, logstate::Any)
@ Base.CoreLogging ./logging.jl:514
[8] with_logger
@ ./logging.jl:626 [inlined]
[9] capture(f::Documenter.var"#53#55"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool)
@ IOCapture ~/.julia/packages/IOCapture/8Uj7o/src/IOCapture.jl:116
[10] runner(#unused#::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/nQAq5/src/expander_pipeline.jl:736
|
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../../../.julia/packages/Documenter/nQAq5/src/utilities/utilities.jl#L44
failed to run `@example` block in src/examples/BjordalsbakkeModel.md:186-188
```@example BjordalsbakkeModel
states(circ_sys)
```
exception =
UndefVarError: `circ_sys` not defined
Stacktrace:
[1] top-level scope
@ BjordalsbakkeModel.md:187
[2] eval
@ ./boot.jl:370 [inlined]
[3] #54
@ ~/.julia/packages/Documenter/nQAq5/src/expander_pipeline.jl:738 [inlined]
[4] cd(f::Documenter.var"#54#56"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[5] (::Documenter.var"#53#55"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/nQAq5/src/expander_pipeline.jl:737
[6] (::IOCapture.var"#3#5"{DataType, Documenter.var"#53#55"{Documenter.Page, Module, Expr}, Task, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})()
@ IOCapture ~/.julia/packages/IOCapture/8Uj7o/src/IOCapture.jl:119
[7] with_logstate(f::Function, logstate::Any)
@ Base.CoreLogging ./logging.jl:514
[8] with_logger
@ ./logging.jl:626 [inlined]
[9] capture(f::Documenter.var"#53#55"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool)
@ IOCapture ~/.julia/packages/IOCapture/8Uj7o/src/IOCapture.jl:116
[10] runner(#unused#::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/nQAq5/src/expander_pipeline.jl:736
|
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../../../.julia/packages/Documenter/nQAq5/src/utilities/utilities.jl#L44
failed to run `@example` block in src/examples/BjordalsbakkeModel.md:192-194
```@example BjordalsbakkeModel
observed(circ_sys)
```
exception =
UndefVarError: `circ_sys` not defined
Stacktrace:
[1] top-level scope
@ BjordalsbakkeModel.md:193
[2] eval
@ ./boot.jl:370 [inlined]
[3] #54
@ ~/.julia/packages/Documenter/nQAq5/src/expander_pipeline.jl:738 [inlined]
[4] cd(f::Documenter.var"#54#56"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[5] (::Documenter.var"#53#55"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/nQAq5/src/expander_pipeline.jl:737
[6] (::IOCapture.var"#3#5"{DataType, Documenter.var"#53#55"{Documenter.Page, Module, Expr}, Task, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})()
@ IOCapture ~/.julia/packages/IOCapture/8Uj7o/src/IOCapture.jl:119
[7] with_logstate(f::Function, logstate::Any)
@ Base.CoreLogging ./logging.jl:514
[8] with_logger
@ ./logging.jl:626 [inlined]
[9] capture(f::Documenter.var"#53#55"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool)
@ IOCapture ~/.julia/packages/IOCapture/8Uj7o/src/IOCapture.jl:116
[10] runner(#unused#::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/nQAq5/src/expander_pipeline.jl:736
|
|
../../../.julia/packages/Documenter/nQAq5/src/utilities/utilities.jl#L44
failed to run `@example` block in src/examples/BjordalsbakkeModel.md:198-200
```@example BjordalsbakkeModel
parameters(circ_sys)
```
exception =
UndefVarError: `circ_sys` not defined
Stacktrace:
[1] top-level scope
@ BjordalsbakkeModel.md:199
[2] eval
@ ./boot.jl:370 [inlined]
[3] #54
@ ~/.julia/packages/Documenter/nQAq5/src/expander_pipeline.jl:738 [inlined]
[4] cd(f::Documenter.var"#54#56"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[5] (::Documenter.var"#53#55"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/nQAq5/src/expander_pipeline.jl:737
[6] (::IOCapture.var"#3#5"{DataType, Documenter.var"#53#55"{Documenter.Page, Module, Expr}, Task, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})()
@ IOCapture ~/.julia/packages/IOCapture/8Uj7o/src/IOCapture.jl:119
[7] with_logstate(f::Function, logstate::Any)
@ Base.CoreLogging ./logging.jl:514
[8] with_logger
@ ./logging.jl:626 [inlined]
[9] capture(f::Documenter.var"#53#55"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool)
@ IOCapture ~/.julia/packages/IOCapture/8Uj7o/src/IOCapture.jl:116
[10] runner(#unused#::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/nQAq5/src/expander_pipeline.jl:736
|
|
../../../.julia/packages/Documenter/nQAq5/src/utilities/utilities.jl#L44
failed to run `@example` block in src/examples/BjordalsbakkeModel.md:210-219
```@example BjordalsbakkeModel
u0 = [
LV.p => MCFP
LV.V => MCFP/Eₘᵢₙ
Csa.p => MCFP
Csa.V => MCFP*C_sa
Csv.p => MCFP
Csv.V => MCFP*C_sv
]
```
exception =
UndefVarError: `Csv` not defined
Stacktrace:
[1] top-level scope
@ BjordalsbakkeModel.md:211
[2] eval
@ ./boot.jl:370 [inlined]
[3] #54
@ ~/.julia/packages/Documenter/nQAq5/src/expander_pipeline.jl:738 [inlined]
[4] cd(f::Documenter.var"#54#56"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[5] (::Documenter.var"#53#55"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/nQAq5/src/expander_pipeline.jl:737
[6] (::IOCapture.var"#3#5"{DataType, Documenter.var"#53#55"{Documenter.Page, Module, Expr}, Task, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})()
@ IOCapture ~/.julia/packages/IOCapture/8Uj7o/src/IOCapture.jl:119
[7] with_logstate(f::Function, logstate::Any)
@ Base.CoreLogging ./logging.jl:514
[8] with_logger
@ ./logging.jl:626 [inlined]
[9] capture(f::Documenter.var"#53#55"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool)
@ IOCapture ~/.julia/packages/IOCapture/8Uj7o/src/IOCapture.jl:116
[10] runner(#unused#::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/nQAq5/src/expander_pipeline.jl:736
|
|
../../../.julia/packages/Documenter/nQAq5/src/utilities/utilities.jl#L44
failed to run `@example` block in src/examples/BjordalsbakkeModel.md:229-231
```@example BjordalsbakkeModel
prob = ODEProblem(circ_sys, u0, tspan)
```
exception =
UndefVarError: `circ_sys` not defined
Stacktrace:
[1] top-level scope
@ BjordalsbakkeModel.md:230
[2] eval
@ ./boot.jl:370 [inlined]
[3] #54
@ ~/.julia/packages/Documenter/nQAq5/src/expander_pipeline.jl:738 [inlined]
[4] cd(f::Documenter.var"#54#56"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[5] (::Documenter.var"#53#55"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/nQAq5/src/expander_pipeline.jl:737
[6] (::IOCapture.var"#3#5"{DataType, Documenter.var"#53#55"{Documenter.Page, Module, Expr}, Task, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})()
@ IOCapture ~/.julia/packages/IOCapture/8Uj7o/src/IOCapture.jl:119
[7] with_logstate(f::Function, logstate::Any)
@ Base.CoreLogging ./logging.jl:514
[8] with_logger
@ ./logging.jl:626 [inlined]
[9] capture(f::Documenter.var"#53#55"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool)
@ IOCapture ~/.julia/packages/IOCapture/8Uj7o/src/IOCapture.jl:116
[10] runner(#unused#::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/nQAq5/src/expander_pipeline.jl:736
|
|
../../../.julia/packages/Documenter/nQAq5/src/utilities/utilities.jl#L44
failed to run `@example` block in src/examples/BjordalsbakkeModel.md:237-240
```@example BjordalsbakkeModel
sol = solve(prob, Vern7(), reltol=1e-12, abstol=1e-12);
nothing #hide
```
exception =
UndefVarError: `prob` not defined
Stacktrace:
[1] top-level scope
@ BjordalsbakkeModel.md:238
[2] eval
@ ./boot.jl:370 [inlined]
[3] #54
@ ~/.julia/packages/Documenter/nQAq5/src/expander_pipeline.jl:738 [inlined]
[4] cd(f::Documenter.var"#54#56"{Module, Expr}, dir::String)
@ Base.Filesystem ./file.jl:112
[5] (::Documenter.var"#53#55"{Documenter.Page, Module, Expr})()
@ Documenter ~/.julia/packages/Documenter/nQAq5/src/expander_pipeline.jl:737
[6] (::IOCapture.var"#3#5"{DataType, Documenter.var"#53#55"{Documenter.Page, Module, Expr}, Task, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})()
@ IOCapture ~/.julia/packages/IOCapture/8Uj7o/src/IOCapture.jl:119
[7] with_logstate(f::Function, logstate::Any)
@ Base.CoreLogging ./logging.jl:514
[8] with_logger
@ ./logging.jl:626 [inlined]
[9] capture(f::Documenter.var"#53#55"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool)
@ IOCapture ~/.julia/packages/IOCapture/8Uj7o/src/IOCapture.jl:116
[10] runner(#unused#::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document)
@ Documenter ~/.julia/packages/Documenter/nQAq5/src/expander_pipeline.jl:736
|
|
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
|
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