…ing of packages; local modules missing

…l input

…option to run the failed jobs from previous run

…ss_tests

…n two steps

…sts_results

Commented out initialization status prints and removed redundant "done" message to streamline the module's import process.

updates:
- [github.com/pre-commit/pre-commit-hooks: v4.6.0 → v5.0.0](pre-commit/pre-commit-hooks@v4.6.0...v5.0.0)
- [github.com/psf/black: 24.8.0 → 24.10.0](psf/black@24.8.0...24.10.0)
- [github.com/pre-commit/mirrors-clang-format: v19.1.0 → v19.1.1](pre-commit/mirrors-clang-format@v19.1.0...v19.1.1)

…o calculate it (denominator 0)

…quared combined.

…squared combined.

…t_images()

…ance to zero if not squared data is available

…and not needed

[pre-commit.ci] pre-commit autoupdate

Consolidate5

…essing

… needed anymore

…icit how this is determined

updates:
- [github.com/pre-commit/mirrors-clang-format: v18.1.8 → v19.1.0](pre-commit/mirrors-clang-format@v18.1.8...v19.1.0)

Ensure correct volume extents by considering parent volume for parameterised volumes. This prevents inaccurate calculations based on a single instance of a repeated solid.

Replaced `mother` and `output` properties with `attached_to` and `output_filename`. Added detailed descriptions and common features for digitizer actors, improving clarity and consistency in the user guide.

Updated field names for statistics in multiple test files and the GateSimulationStatisticsActor class for better consistency. Changed 'run_count', 'event_count', 'track_count', and 'step_count' to 'runs', 'events', 'tracks', and 'steps' respectively.
Also, add setter_hook for output_filename, set write_to_disk to True if the filename is not "auto" (default)

Corrected a typo in the word "explicitly" within a comment. Also, added "_NodeMixin__children" to known_attributes to suppress warnings related to undeclared attributes in anytree.

Removed unused commented-out initialization of the `date` attribute. Updated thread statistics to be merged into `merged_data.nb_threads` and corrected date assignment to `counts.start_time` during parsing.

Updated the variable name for checking volume overlaps from `g4_check_overlap_flag` to `check_volumes_overlap` across multiple files. This change ensures consistency and readability in the codebase.

The type hints provide better code clarity and assist IDEs with more accurate autocompletions and error checking. This change includes optional and union types, improving overall maintainability and readability of the codebase.

Commented out debug print statements in `LazyModuleLoader` for cleaner logs during module import. Added an informative print statement to display Geant4 Qt status and version, enhancing the output details for better tracking of Geant4 visual options.

Ensure that the progress bar step is always at least 1 to prevent invalid step values. This change adjusts the step size conditionally based on the expected number of events.

Refactor `read_stat_file` to handle encoding better by adding a guessing mechanism for JSON or legacy encodings. Modify image comparison functions to return profile data and add a profile SAD check with a specified tolerance.

Update associated tests. It is unclear how the "confine" function in Geant4 handles the boolean solid.

updates:
- [github.com/pre-commit/pre-commit-hooks: v4.6.0 → v5.0.0](pre-commit/pre-commit-hooks@v4.6.0...v5.0.0)
- [github.com/psf/black: 24.8.0 → 24.10.0](psf/black@24.8.0...24.10.0)
- [github.com/pre-commit/mirrors-clang-format: v19.1.0 → v19.1.1](pre-commit/mirrors-clang-format@v19.1.0...v19.1.1)

Commented out initialization status prints and removed redundant "done" message to streamline the module's import process.