WebAlign is one of several tools developed by the Nesys laboratory, University of Oslo and participating to the Human Brain Project (HBP) with the aim of facilitating brain atlas based analysis and integration of experimental data and knowledge about the human and rodent brain. WebAlign is a online tool for user guided affine spatial registration (anchoring) of sectional image data, typically high resolution histological images, to a 3D reference atlas space. A key feature of the tool is its ability to generate user defined cut planes through the atlas templates that match the orientation of the cutting plane of the 2D experimental images (atlas maps).
WebAlign is developed by the Neural Systems Laboratory at the Institute of Basic Medical Sciences, University of Oslo, Norway. WebAlign was developed with support from the EBRAINS infrastructure, and funding from the European Union’s Horizon 2020 Framework Programme for Research and Innovation under the Framework Partnership Agreement No. 650003 (HBP FPA).
https://webalign.readthedocs.io/en/latest/index.html
Gergely Csucs
Maja A Puchades, Jan G Bjaalie.
- Source code: MIT License
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