WHS_SD_Rat_v4_39um.json

{"name":"WHS SD Rat v4","encoding":1,"xdim":512,"ydim":1024,"zdim":512,"labels":[{},
{"rgb":"ff3427","name":"corticofugal tract and corona radiata"},
{"rgb":"0000ff","name":"Subthalamic nucleus"},
{"rgb":"ffff01","name":"Molecular cell layer of the cerebellum"},
{"rgb":"00ffff","name":"Cerebellum, unspecified"},
{"rgb":"ff00ff","name":"alveus of the hippocampus"},
{"rgb":"34ff0d","name":"inferior cerebellar peduncle"},
{"rgb":"1d68eb","name":"Cingulate area 2"},
{"rgb":"1ae7ff","name":"Entopeduncular nucleus"},
{"rgb":"022cff","name":"Ventricular system, unspecified"},
{"rgb":"d4ff00","name":"medial lemniscus, unspecified"},
{"rgb":"ff19f0","name":"facial nerve, unspecified"},
{"rgb":"7cfc00","name":"anterior commissure, anterior limb"},
{"rgb":"ffba00","name":"anterior commissure, posterior limb"},
{"rgb":"ae00e8","name":"ventral hippocampal commissure"},
{"rgb":"ff0800","name":"Septal region"},
{"rgb":"30da00","name":"optic nerve"},
{"rgb":"267eff","name":"optic tract and optic chiasm"},
{"rgb":"daaa3e","name":"Pineal gland"},
{"rgb":"86ff5a","name":"Spinal cord"},
{"rgb":"21e6ff","name":"commissure of the superior colliculus"},
{"rgb":"9953ff","name":"Brainstem, unspecified"},
{"rgb":"e278a1","name":"Hypothalamic region, unspecified"},
{"rgb":"5600dd","name":"Superficial gray layer of the superior colliculus"},
{"rgb":"07ff59","name":"Periaqueductal gray"},
{"rgb":"15c0ff","name":"fornix"},
{"rgb":"eeba00","name":"mammillotegmental tract"},
{"rgb":"adff2f","name":"commissural stria terminalis"},
{"rgb":"e1970f","name":"Deeper layers of the superior colliculus"},
{"rgb":"eb57ff","name":"Periventricular gray"},
{"rgb":"faf4f7","name":"genu of the facial nerve"},
{"rgb":"00d70b","name":"Pontine nuclei"},
{"rgb":"00ff1d","name":"fimbria of the hippocampus"},
{"rgb":"f44345","name":"fasciculus retroflexus"},
{"rgb":"00ff00","name":"stria medullaris thalami"},
{"rgb":"ee7533","name":"stria terminalis"},
{"rgb":"ff00da","name":"posterior commissure"},
{"rgb":"0f6de6","name":"Glomerular layer of the accessory olfactory bulb"},
{"rgb":"ffe300","name":"Glomerular layer of the olfactory bulb"},
{"rgb":"ff8700","name":"Olfactory bulb, unspecified"},
{"rgb":"ff6e00","name":"corpus callosum and associated subcortical white matter"},
{"rgb":"bc20ad","name":"brachium of the superior colliculus"},
{"rgb":"ff2a27","name":"inferior colliculus, commissure"},
{"rgb":"27f4fd","name":"Central canal"},
{"rgb":"3fc0ff","name":"Interpeduncular nucleus"},
{"rgb":"b31c35","name":"ascending fibers of the facial nerve"},
{"rgb":"ff4fce","name":"anterior commissure, intrabulbar part"},
{"rgb":"00f60e","name":"Inferior olive"},
{"rgb":"5bf1ff","name":"Spinal trigeminal nucleus"},
{"rgb":"fa8072","name":"spinal trigeminal tract"},
{"rgb":"ced307","name":"Frontal association cortex"},
{"rgb":"86cc4c","name":"middle cerebellar peduncle"},
{"rgb":"80aaff","name":"transverse fibers of the pons"},
{"rgb":"45ebca","name":"habenular commissure"},
{"rgb":"de07ed","name":"Nucleus of the stria medullaris"},
{"rgb":"e1f00d","name":"Basal forebrain region, unspecified"},
{"rgb":"faaa40","name":"supraoptic decussation"},
{"rgb":"4196ff","name":"medial lemniscus decussation"},
{"rgb":"7209d4","name":"pyramidal decussation"},
{"rgb":"0008b6","name":"Bed nucleus of the stria terminalis"},
{"rgb":"ff571e","name":"Pretectal region"},
{"rgb":"a5836b","name":"Cornu ammonis 3"},
{"rgb":"5b2d0a","name":"Dentate gyrus"},
{"rgb":"ffff00","name":"Cornu ammonis 2"},
{"rgb":"d9680d","name":"Cornu ammonis 1"},
{"rgb":"ff0000","name":"Fasciola cinereum"},
{"rgb":"ffc000","name":"Subiculum"},
{"rgb":"287082","name":"Postrhinal cortex"},
{"rgb":"507baf","name":"Presubiculum"},
{"rgb":"173660","name":"Parasubiculum"},
{"rgb":"cd33ff","name":"Perirhinal area 35"},
{"rgb":"7030a0","name":"Perirhinal area 36"},
{"rgb":"7abb33","name":"Medial entorhinal cortex"},
{"rgb":"5a6f2f","name":"Lateral entorhinal cortex"},
{"rgb":"009037","name":"Vestibular apparatus"},
{"rgb":"00ff1c","name":"Cochlea"},
{"rgb":"fd9400","name":"Cochlear nerve"},
{"rgb":"fd3200","name":"Vestibular nerve"},
{"rgb":"000cff","name":"Ventral cochlear nucleus, granule cell layer"},
{"rgb":"341d90","name":"4th ventricle"},
{"rgb":"5c9cd3","name":"Dorsal cochlear nucleus, molecular layer"},
{"rgb":"00509c","name":"Dorsal cochlear nucleus, fusiform and granule layer"},
{"rgb":"c5eeff","name":"Dorsal cochlear nucleus, deep core"},
{"rgb":"ffd900","name":"acoustic striae"},
{"rgb":"d5ff00","name":"trapezoid body"},
{"rgb":"00ff51","name":"Nucleus of the trapezoid body"},
{"rgb":"00eeff","name":"Superior paraolivary nucleus"},
{"rgb":"dbef3d","name":"Medial superior olive"},
{"rgb":"234cbe","name":"Lateral superior olive"},
{"rgb":"019915","name":"Superior periolivary region"},
{"rgb":"00aeff","name":"Ventral periolivary nuclei"},
{"rgb":"ff0073","name":"Lateral lemniscus, ventral nucleus"},
{"rgb":"ab105b","name":"Lateral lemniscus, intermediate nucleus"},
{"rgb":"6c125b","name":"Lateral lemniscus, dorsal nucleus"},
{"rgb":"ff1d00","name":"lateral lemniscus, commissure"},
{"rgb":"ffa600","name":"lateral lemniscus, unspecified"},
{"rgb":"ceff8e","name":"Inferior colliculus, dorsal cortex"},
{"rgb":"00eefe","name":"Inferior colliculus, central nucleus"},
{"rgb":"3088cb","name":"Inferior colliculus, external cortex"},
{"rgb":"b03a48","name":"inferior colliculus, brachium"},
{"rgb":"ff2ff2","name":"Medial geniculate body, marginal zone"},
{"rgb":"ffd700","name":"Primary auditory area"},
{"rgb":"f0ffff","name":"Secondary auditory area, dorsal part"},
{"rgb":"d8bfd8","name":"Secondary auditory area, ventral part"},
{"rgb":"f49cff","name":"external medullary lamina, auditory radiation"},
{"rgb":"2298ff","name":"Ventral cochlear nucleus, anterior part"},
{"rgb":"00e6cf","name":"Ventral cochlear nucleus, posterior part"},
{"rgb":"00ff6a","name":"Ventral cochlear nucleus, cap area"},
{"rgb":"b9ffe9","name":"Spiral ganglion"},
{"rgb":"63cd00","name":"Nucleus sagulum"},
{"rgb":"6e00ff","name":"Reticular (pre)thalamic nucleus, auditory segment"},
{"rgb":"ff00dd","name":"lateral olfactory tract"},
{"rgb":"00ccff","name":"Piriform cortex, layer 1"},
{"rgb":"0000fe","name":"Piriform cortex, layer 2"},
{"rgb":"a578dd","name":"Piriform cortex, layer 3"},
{"rgb":"e6d8fa","name":"Nucleus accumbens, core"},
{"rgb":"63c512","name":"Substantia nigra, reticular part"},
{"rgb":"ffff7f","name":"Substantia nigra, compact part"},
{"rgb":"009f9f","name":"Substantia nigra, lateral part"},
{"rgb":"582f6c","name":"Nucleus accumbens, shell"},
{"rgb":"00a2ff","name":"Ventral pallidum"},
{"rgb":"ff55ff","name":"Globus pallidus external, medial part"},
{"rgb":"7fffd4","name":"Ventral tegmental area"},
{"rgb":"814f9b","name":"Caudate putamen"},
{"rgb":"c819c8","name":"Globus pallidus external, lateral part"},
{"rgb":"dc143c","name":"Ventral striatal region, unspecified"},
{"rgb":"00d9ff","name":"Reticular (pre)thalamic nucleus, unspecified"},
{"rgb":"b7c788","name":"Peripeduncular nucleus"},
{"rgb":"ff1900","name":"Pregeniculate nucleus "},
{"rgb":"ffe200","name":"Dorsal lateral geniculate nucleus"},
{"rgb":"d96c00","name":"Lateral habenular nucleus"},
{"rgb":"cd0018","name":"Medial habenular nucleus"},
{"rgb":"e470d6","name":"Posterior intralaminar nucleus"},
{"rgb":"ffffc8","name":"Posterior thalamic nuclear group, triangular part"},
{"rgb":"cd0006","name":"Parataenial thalamic nucleus"},
{"rgb":"830a79","name":"Anterodorsal thalamic nucleus"},
{"rgb":"ef79da","name":"Anteroventral thalamic nucleus, dorsomedial part"},
{"rgb":"65238e","name":"Anteroventral thalamic nucleus, ventrolateral part"},
{"rgb":"00ff11","name":"Rhomboid thalamic nucleus"},
{"rgb":"23ffec","name":"Xiphoid thalamic nucleus"},
{"rgb":"ffaa00","name":"Reuniens thalamic nucleus"},
{"rgb":"00b97e","name":"Ventromedial thalamic nucleus"},
{"rgb":"8200d9","name":"Submedius thalamic nucleus"},
{"rgb":"8b5d8b","name":"Angular thalamic nucleus"},
{"rgb":"ff00fe","name":"Ventral posteromedial thalamic nucleus"},
{"rgb":"ff7b00","name":"Laterodorsal thalamic nucleus, dorsomedial part"},
{"rgb":"2b991f","name":"Laterodorsal thalamic nucleus, ventrolateral part"},
{"rgb":"ffff02","name":"Posterior thalamic nucleus"},
{"rgb":"aaaaff","name":"Ventrolateral thalamic nucleus"},
{"rgb":"ff557f","name":"Mediodorsal thalamic nucleus, lateral part"},
{"rgb":"55aa00","name":"Mediodorsal thalamic nucleus, central part"},
{"rgb":"d8bfd9","name":"Zona incerta, dorsal part"},
{"rgb":"4bc88a","name":"Zona incerta, ventral part"},
{"rgb":"c2474f","name":"Zona incerta, A13 dopamine cells"},
{"rgb":"db8ff7","name":"pretectothalamic lamina"},
{"rgb":"aaffff","name":"Mediodorsal thalamic nucleus, medial part"},
{"rgb":"9c3333","name":"Paraventricular thalamic nuclei (anterior and posterior)"},
{"rgb":"f0f8ff","name":"Paracentral thalamic nucleus"},
{"rgb":"e0b640","name":"Central medial thalamic nucleus"},
{"rgb":"9932cc","name":"Central lateral thalamic nucleus"},
{"rgb":"aaff00","name":"external medullary lamina, unspecified"},
{"rgb":"0055ff","name":"Anteromedial thalamic nucleus"},
{"rgb":"f875de","name":"Interanteromedial thalamic nucleus"},
{"rgb":"1e90ff","name":"Zona incerta, rostral part"},
{"rgb":"a0522d","name":"Intermediodorsal thalamic nucleus"},
{"rgb":"00ff08","name":"Ventral posterior nucleus of the thalamus, parvicellular part"},
{"rgb":"ffefd5","name":"Parafascicular thalamic nucleus"},
{"rgb":"0000cd","name":"Retroreuniens thalamic nucleus"},
{"rgb":"d2b68c","name":"superior cerebellar peduncle and prerubral field"},
{"rgb":"000080","name":"Intergeniculate leaflet"},
{"rgb":"e9967a","name":"Subparafascicular nucleus"},
{"rgb":"fffafa","name":"Fields of Forel"},
{"rgb":"9370db","name":"Subgeniculate nucleus"},
{"rgb":"833280","name":"Ethmoid-Limitans nucleus"},
{"rgb":"c7573d","name":"Lateral posterior thalamic nucleus, lateral part"},
{"rgb":"ffb6c1","name":"Zona incerta, A11 dopamine cells"},
{"rgb":"3cb371","name":"Lateral posterior thalamic nucleus, mediorostral part"},
{"rgb":"ffebcd","name":"Lateral posterior thalamic nucleus, mediocaudal part"},
{"rgb":"ffe4c4","name":"Zona incerta, caudal part"},
{"rgb":"9b946f","name":"intramedullary thalamic area"},
{"rgb":"ff5c0a","name":"internal medullary lamina"},
{"rgb":"ff8800","name":"Ventral anterior thalamic nucleus"},
{"rgb":"ab563e","name":"Ventral posterolateral thalamic nucleus"},
{"rgb":"efa300","name":"Medial geniculate body, dorsal division"},
{"rgb":"0af4d9","name":"Medial geniculate body, medial division"},
{"rgb":"833a1f","name":"Medial geniculate body, ventral division"},
{"rgb":"0af496","name":"Medial geniculate body, suprageniculate nucleus"},
{"rgb":"ff0001","name":"Ventrolateral orbital area"},
{"rgb":"ffaec9","name":"Lateral orbital area"},
{"rgb":"c8bfe7","name":"Ventral orbital area"},
{"rgb":"3f48cc","name":"Medial orbital area"},
{"rgb":"b97a57","name":"Dorsolateral orbital area"},
{"rgb":"a349a4","name":"Prelimbic area"},
{"rgb":"00a2e8","name":"Secondary motor area"},
{"rgb":"880015","name":"Frontal association area 3"},
{"rgb":"99d9ea","name":"Primary motor area"},
{"rgb":"ffc90e","name":"Agranular insular cortex, ventral area"},
{"rgb":"ff7f27","name":"Agranular insular cortex dorsal area "},
{"rgb":"008080","name":"Cingulate area 1"},
{"rgb":"99d9c8","name":"Claustrum"},
{"rgb":"22b14c","name":"Infralimbic area"},
{"rgb":"fff200","name":"Dysgranular insular cortex"},
{"rgb":"efe4b0","name":"Granular insular cortex"},
{"rgb":"b90e83","name":"Primary somatosensory area, forelimb representation"},
{"rgb":"ed1c24","name":"Primary somatosensory area, dysgranular zone"},
{"rgb":"ff80c0","name":"Primary somatosensory area, face representation"},
{"rgb":"c864fa","name":"Secondary somatosensory area"},
{"rgb":"886415","name":"Primary somatosensory area, hindlimb representation"},
{"rgb":"b5e61d","name":"Agranular insular cortex, posterior area "},
{"rgb":"78b14c","name":"Primary somatosensory area, barrel field"},
{"rgb":"c849a4","name":"Retrosplenial dysgranular area"},
{"rgb":"e196c9","name":"Primary somatosensory area, trunk representation"},
{"rgb":"1964c8","name":"Retrosplenial granular area"},
{"rgb":"fff01d","name":"Parietal association cortex, lateral area"},
{"rgb":"6c006c","name":"Parietal association cortex, medial area"},
{"rgb":"800040","name":"Parietal association cortex, posterior area "},
{"rgb":"543423","name":"Primary visual area"},
{"rgb":"ff6464","name":"Secondary visual area, lateral part"},
{"rgb":"008000","name":"Temporal association cortex"},
{"rgb":"800064","name":"Secondary visual area, medial part"},
{"rgb":"010a64","name":"Endopiriform nucleus"},
{"rgb":"0214c8","name":"Amygdaloid area, unspecified"},
{"rgb":"e6b843","name":"Nucleus of the lateral olfactory tract"}],
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