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Adds Sensor Util Functions #130

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315 changes: 315 additions & 0 deletions examples/sensor_utils.ipynb
Original file line number Diff line number Diff line change
@@ -0,0 +1,315 @@
{
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"cells": [
{
"cell_type": "markdown",
"metadata": {},
"source": [
"# Sensor Utils\n"
]
},
{
"cell_type": "code",
"execution_count": 1,
"metadata": {},
"outputs": [],
"source": [
"import os\n",
"\n",
"os.environ[\"ISISROOT\"] = \"/Users/astamile/ISIS3/build\"\n",
"os.environ[\"ISISDATA\"] = \"/Volumes/isis_data1/isis_data/\"\n",
"\n",
"from csmapi import csmapi\n",
"from knoten import csm, sensor_utils\n",
"\n",
"from knoten.shape import Ellipsoid\n",
"from knoten.illuminator import Illuminator\n",
"\n",
"import ale\n",
"import json"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"## Create a usgscsm sensor model"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": [
"fileName = \"data/N1573082850_1.cub\"\n",
"\n",
"kernels = ale.util.generate_kernels_from_cube(fileName, expand=True)\n",
"isd_string = ale.loads(fileName, props={'kernels': kernels})\n",
"csm_isd = os.path.splitext(fileName)[0] + '.json'\n",
"\n",
"with open(csm_isd, 'w') as isd_file:\n",
" isd_file.write(isd_string)"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"## Run Sensor Utils with usgscsm sensor model and image point"
]
},
{
"cell_type": "code",
"execution_count": 3,
"metadata": {},
"outputs": [],
"source": [
"camera = csm.create_csm(csm_isd)\n",
"image_pt = csmapi.ImageCoord(511.5, 511.5)\n",
"shape = Ellipsoid.from_csm_sensor(camera)\n",
"illuminator = Illuminator()"
]
},
{
"cell_type": "code",
"execution_count": 4,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"38.87212509629895"
]
},
"execution_count": 4,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"phaseAngle = sensor_utils.phase_angle(image_pt, camera, shape, illuminator)\n",
"\n",
"phaseAngle"
]
},
{
"cell_type": "code",
"execution_count": 5,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"49.60309924893989"
]
},
"execution_count": 5,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"emissionAngle = sensor_utils.emission_angle(image_pt, camera, shape)\n",
"\n",
"emissionAngle"
]
},
{
"cell_type": "code",
"execution_count": 6,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"2903512972.146115"
]
},
"execution_count": 6,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"slantDistance = sensor_utils.slant_distance(image_pt, camera, shape)\n",
"\n",
"slantDistance"
]
},
{
"cell_type": "code",
"execution_count": 7,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"2943536048.858226"
]
},
"execution_count": 7,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"targetCenterDistance = sensor_utils.target_center_distance(image_pt, camera)\n",
"\n",
"targetCenterDistance"
]
},
{
"cell_type": "code",
"execution_count": 8,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"LatLon(lat=3.2229625890973583, lon=258.6197326526089)"
]
},
"execution_count": 8,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"subSpacecraftPoint = sensor_utils.sub_spacecraft_point(image_pt, camera)\n",
"\n",
"subSpacecraftPoint"
]
},
{
"cell_type": "code",
"execution_count": 9,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"59096282.024265066"
]
},
"execution_count": 9,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"localRadius = sensor_utils.local_radius(image_pt, camera, shape)\n",
"\n",
"localRadius"
]
},
{
"cell_type": "code",
"execution_count": 10,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"(79.34815579474038, -2.7790780986459485)"
]
},
"execution_count": 10,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"rightAscDec = sensor_utils.right_ascension_declination(image_pt, camera)\n",
"\n",
"rightAscDec"
]
},
{
"cell_type": "code",
"execution_count": 11,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"17397.96094194587"
]
},
"execution_count": 11,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"lineResolution = sensor_utils.line_resolution(image_pt, camera, shape)\n",
"\n",
"lineResolution"
]
},
{
"cell_type": "code",
"execution_count": 12,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"17397.93370038153"
]
},
"execution_count": 12,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"sampleResolution = sensor_utils.sample_resolution(image_pt, camera, shape)\n",
"\n",
"sampleResolution"
]
},
{
"cell_type": "code",
"execution_count": 13,
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"17397.9473211637"
]
},
"execution_count": 13,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"pixelResolution = sensor_utils.pixel_resolution(image_pt, camera, shape)\n",
"\n",
"pixelResolution"
]
}
],
"metadata": {
"kernelspec": {
"display_name": "Python 3 (ipykernel)",
"language": "python",
"name": "python3"
},
"language_info": {
"codemirror_mode": {
"name": "ipython",
"version": 3
},
"file_extension": ".py",
"mimetype": "text/x-python",
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": "3.9.18"
}
},
"nbformat": 4,
"nbformat_minor": 4
}
29 changes: 29 additions & 0 deletions knoten/bundle.py
Original file line number Diff line number Diff line change
Expand Up @@ -212,6 +212,35 @@ def compute_ground_partials(sensor, ground_pt):
partials = np.array(sensor.computeGroundPartials(csm_ground))
return np.reshape(partials, (2, 3))

def compute_image_partials(sensor, ground_pt):
"""
Compute the partial derivatives of the ground point with respect to
the line and sample at a ground point.

These are not normally available from the CSM model, so we use
csm::RasterGM::computeGroundPartials to get the Jacobian of the ground to
image transformation. Then we use the pseudoinverse of that to get the
Jacobian of the image to ground transformation.

Parameters
----------
sensor : CSM sensor
The CSM sensor model
ground_pt : array
The (x, y, z) ground point to compute the partial derivatives W.R.T.

Returns
-------
: array
The partial derivatives of the image to ground transformation
"""
if isinstance(ground_pt, csmapi.EcefCoord):
ground_pt = [ground_pt.x, ground_pt.y, ground_pt.z]
ground_matrix = compute_ground_partials(sensor, ground_pt)
image_matrix = np.linalg.pinv(ground_matrix)

return image_matrix.flatten()

def compute_coefficient_columns(network, sensors, parameters):
"""
Compute the columns for different coefficients
Expand Down
32 changes: 32 additions & 0 deletions knoten/csm.py
Original file line number Diff line number Diff line change
Expand Up @@ -73,6 +73,38 @@ def create_camera(label, url='http://pfeffer.wr.usgs.gov/api/1.0/pds/'):
if plugin.canModelBeConstructedFromISD(isd, model_name):
model = plugin.constructModelFromISD(isd, model_name)
return model

def get_state(sensor, image_pt):
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"""
Get the state of the sensor model at a given image point.

Parameters
----------
sensor : object
A CSM compliant sensor model object

image_pt : tuple
Pair of x, y (sample, line) coordinates in pixel space

Returns
-------
: dict
Dictionary containing lookVec, sensorPos, sensorTime, and imagePoint
"""
if not isinstance(sensor, csmapi.RasterGM):
raise TypeError("inputted sensor not a csm.RasterGM object")

sensor_time = sensor.getImageTime(image_pt)
locus = sensor.imageToRemoteImagingLocus(image_pt)
sensor_position = sensor.getSensorPosition(image_pt)

sensor_state = {
"lookVec": locus.direction,
"sensorPos": sensor_position,
"sensorTime": sensor_time,
"imagePoint": image_pt
}
return sensor_state

def _from_state(state, verbose):
with open(state, 'r') as stream:
Expand Down
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