Update to qupath-extension-biop-omero-1.0.x

Breaking change

• The omero folder under your HRM-share has to be cleaned before using this new release (both under raw and deconvolved folder). This is due to changes in the way of downloading images (coming from omero-gateway update).
• You need to have the version 1.0.1 of the qupath-extension-biop-omero to make this extension working.

Update dependencies

• simple-omero-client 5.18.0
• omero-gateway 5.9.1
• qupath-extension-biop-omero 1.0.1
• upgrade to QuPath 0.5.1

Warning

You need to upgrade your OMERO-Java dependencies to the latest version. Please, download and replace your existing

• omero-ij plugin by the version 5.8.4 omero_ij-5.8.4-all.jar
• omero java dependencies (i.e. libs folder) by the version 5.6.11 OMERO.java-5.6.11-ice36.zip

Improvements

• Fix Transfer tags from raw to deconvolved images #3
• Fix Add images to new QuPath project #4
• Pre fill the username ans server host and select the right textField.
• Adding MAC support
• Use simple-omero-client as the main omero-client and refactor the code accordingly
• Add a threshold on the name similarity
• Update logger