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eubic23_internal_ions

Usage json_to_dataframes

import pandas as pd
from json_to_dataframes import json_to_dataframes

dataframes = json_to_dataframes("data.json")

fragments_dataframe = dataframes[0]
spectra_dataframe = dataframes[1]

fragments_dataframe.head()

Usage web app

Maximum upload file size will be 5GB

streamlit run streamlit_app.py --server.maxUploadSize 5000

Quick Setup with Docker

  • Install Docker.
  • To run Fragment Explorer on your own server:
    docker run -d --restart always -p 80:8501 michabirklbauer/fragmentexplorer:latest
  • To run Fragment Explorer locally:
    docker run -p 8501:8501 michabirklbauer/fragmentexplorer:latest