Updates for component NoahMP land model

.gitmodules

@@ -1,7 +1,7 @@
 [submodule "FV3"]
   path = FV3
-  url = https://github.com/NOAA-EMC/fv3atm
-  branch = develop
+  url = https://github.com/uturuncoglu/fv3atm
+  branch = feature/s2s_with_lnd
 [submodule "WW3"]
   path = WW3
   url = https://github.com/NOAA-EMC/WW3
@@ -45,4 +45,4 @@
 [submodule "NOAHMP"]
   path = NOAHMP-interface/noahmp
   url = https://github.com/NOAA-EMC/noahmp
-  branch = develop
+  branch = feature/perf

tests/fv3_conf/control_run.IN

@@ -93,11 +93,7 @@ else
 fi
 
 if [ $TILEDFIX = .true. ]; then
-    if [ $CPLLND == .true. ]; then
-        cp    @[INPUTDATA_ROOT]/FV3_fix_tiled/@[ATMRES]/@[ATMRES]*.nc INPUT/.
-    else
-        cp    @[INPUTDATA_ROOT]/FV3_fix_tiled/@[ATMRES]/@[ATMRES]*.nc .
-    fi
+    cp    @[INPUTDATA_ROOT]/FV3_fix_tiled/@[ATMRES]/@[ATMRES]*.nc .
     cp    @[INPUTDATA_ROOT]/FV3_fix/global_glacier.2x2.grb .
     cp    @[INPUTDATA_ROOT]/FV3_fix/global_maxice.2x2.grb .
     cp    @[INPUTDATA_ROOT]/FV3_fix/RTGSST.1982.2012.monthly.clim.grb .

tests/fv3_conf/noahmp_run.IN

@@ -2,17 +2,14 @@ mkdir -p INPUT RESTART
 
 if [ "$LNDRES" = "C96" ]; then
   inputdir=FV3_input_data
-elif [ "$LNDRES" = "C48" ]; then
-  inputdir=FV3_input_data48
-elif [ "$LNDRES" = "C192" ]; then
-  inputdir=FV3_input_data192
-elif [ "$LNDRES" = "C384" ]; then
-  inputdir=FV3_input_data384
-elif [ "$LNDRES" = "C768" ]; then
-  inputdir=FV3_input_data768
+else
+  inputdir=FV3_input_data${LNDRES#C}
 fi
 echo "inputdir=$inputdir,LNDRES=$LNDRES"
 
+export OCNRES=025
+V2_SFC_FILE=${V2_SFC_FILE:-false}
+
 if [ $DATM_CDEPS == true ]; then
   targetdir="./INPUT"
   rsync -arv @[INPUTDATA_ROOT]/NOAHMP_IC/$atm_datamode/ufs-land_@[LNDRES]_init_fields.tile1.nc ./${targetdir}/@[LNDRES].initial.tile1.nc
@@ -33,15 +30,26 @@ else
   fi
 
   if [ $WARM_START = .false. ]; then
-    cp -r @[INPUTDATA_ROOT]/${inputdir}/INPUT_L127/sfc_data.tile*.nc ${targetdir}/.
+    if [ $S2S = true ]; then
+      if [ "$V2_SFC_FILE" = "true" ]; then
+        cp -r @[INPUTDATA_ROOT]/${inputdir}/INPUT_L127_v2_sfc/sfc_data.tile*.nc ${targetdir}/.
+      else
+        cp -r @[INPUTDATA_ROOT]/${inputdir}/INPUT_L127/sfc_data.tile*.nc ${targetdir}/.
+      fi
+    else
+      if [ "$V2_SFC_FILE" = "true" ]; then
+        cp -r @[INPUTDATA_ROOT]/${inputdir}/INPUT_L127_mx${OCNRES}_v2_sfc/sfc_data.tile*.nc ${targetdir}/.
+      else
+        cp -r @[INPUTDATA_ROOT]/${inputdir}/INPUT_L127_mx${OCNRES}/sfc_data.tile*.nc ${targetdir}/.
+      fi
+    fi
   else
     # land restart file
     cp ../${DEP_RUN}${SUFFIX}/ufs.cpld.lnd.out.${RESTART_FILE_SUFFIX_SECS}.tile*.nc RESTART/.
     # CMEPS restart and pointer files
     RFILE=ufs.cpld.cpl.r.${RESTART_FILE_SUFFIX_SECS}.nc
     cp  ../${DEP_RUN}${SUFFIX}/RESTART/${RFILE} .
     ls -1 ${RFILE}>rpointer.cpl
-    # link grid spec file
   fi
 fi
 

tests/parm/ufs.configure.atm_lnd.IN

@@ -46,6 +46,7 @@ LND_attributes::
   Diagnostic = 0
   mosaic_file = @[mosaic_file]
   input_dir = @[lnd_input_dir]
+  fixed_dir = @[lnd_fixed_dir]
   ic_type = @[lnd_ic_type]
   layout = @[layout_x]:@[layout_y] # need to be consistent with number of PEs
   num_soil_levels = 4

tests/parm/ufs.configure.s2swal_fast_esmf.IN

@@ -0,0 +1,196 @@
+#############################################
+####  UFS Run-Time Configuration File  ######
+#############################################
+
+# ESMF #
+logKindFlag:            ESMF_LOGKIND_MULTI
+globalResourceControl:  true
+
+# EARTH #
+EARTH_component_list: MED ATM CHM OCN ICE WAV LND
+EARTH_attributes::
+  Verbosity = 0
+::
+
+# MED #
+MED_model:                      @[med_model]
+MED_petlist_bounds:             @[med_petlist_bounds]
+MED_omp_num_threads:            @[med_omp_num_threads]
+
+# ATM #
+ATM_model:                      @[atm_model]
+ATM_petlist_bounds:             @[atm_petlist_bounds]
+ATM_omp_num_threads:            @[atm_omp_num_threads]
+ATM_attributes::
+  Verbosity = 0
+  DumpFields = false
+  ProfileMemory = false
+  OverwriteSlice = true
+::
+
+# CHM #
+CHM_model:                      @[chm_model]
+CHM_petlist_bounds:             @[chm_petlist_bounds]
+CHM_omp_num_threads:            @[chm_omp_num_threads]
+CHM_attributes::
+  Verbosity = 0
+::
+
+# OCN #
+OCN_model:                      @[ocn_model]
+OCN_petlist_bounds:             @[ocn_petlist_bounds]
+OCN_omp_num_threads:            @[ocn_omp_num_threads]
+OCN_attributes::
+  Verbosity = 0
+  DumpFields = false
+  ProfileMemory = false
+  OverwriteSlice = true
+  mesh_ocn = @[MESH_OCN]
+  use_coldstart = @[use_coldstart]
+  use_mommesh = @[use_mommesh]
+::
+
+# ICE #
+ICE_model:                      @[ice_model]
+ICE_petlist_bounds:             @[ice_petlist_bounds]
+ICE_omp_num_threads:            @[ice_omp_num_threads]
+ICE_attributes::
+  Verbosity = 0
+  DumpFields = false
+  ProfileMemory = false
+  OverwriteSlice = true
+  mesh_ice = @[MESH_ICE]
+  eps_imesh = @[eps_imesh]
+  stop_n = @[RESTART_N]
+  stop_option = nhours
+  stop_ymd = -999
+::
+
+# WAV #
+WAV_model:                      @[wav_model]
+WAV_petlist_bounds:             @[wav_petlist_bounds]
+WAV_omp_num_threads:            @[wav_omp_num_threads]
+WAV_attributes::
+  Verbosity = 0
+  OverwriteSlice = false
+  mesh_wav = @[MESH_WAV]
+  user_sets_restname = @[WW3_user_sets_restname]
+::
+
+# LND #
+LND_model:                      @[lnd_model]
+LND_petlist_bounds:             @[lnd_petlist_bounds]
+LND_omp_num_threads:            @[lnd_omp_num_threads]
+LND_attributes::
+  Verbosity = 1
+  Diagnostic = 0
+  mosaic_file = @[mosaic_file]
+  input_dir = @[lnd_input_dir]
+  fixed_dir = @[lnd_fixed_dir]
+  ic_type = @[lnd_ic_type]
+  layout = @[layout_x]:@[layout_y] # need to be consistent with number of PEs
+  num_soil_levels = 4
+  forcing_height = 10
+  soil_level_thickness = 0.10:0.30:0.60:1.00
+  soil_level_nodes = 0.05:0.25:0.70:1.50
+  dynamic_vegetation_option = 4
+  canopy_stomatal_resistance_option = 2
+  soil_wetness_option = 1
+  runoff_option = 1
+  surface_exchange_option = 3
+  supercooled_soilwater_option = 1
+  frozen_soil_adjust_option = 1
+  radiative_transfer_option = 3
+  snow_albedo_option = @[snow_albedo_option]
+  precip_partition_option = @[precip_partition_option]
+  soil_temp_lower_bdy_option = 2
+  soil_temp_time_scheme_option = 3
+  surface_evap_resistance_option = 1 # not used, it is fixed to 4 in sfc_noahmp_drv.F90
+  glacier_option = 1
+  surface_thermal_roughness_option = 2
+  output_freq = 3600
+  restart_freq = -1
+  calc_snet = @[CALC_SNET]
+  initial_albedo = @[initial_albedo]
+::
+
+# CMEPS warm run sequence
+runSeq::
+@@[coupling_interval_slow_sec]
+   MED med_phases_prep_ocn_avg
+   MED -> OCN :remapMethod=redist
+   OCN
+   @@[coupling_interval_fast_sec]
+     MED med_phases_prep_atm
+     MED med_phases_prep_ice
+     MED med_phases_prep_lnd
+     MED med_phases_prep_wav_accum
+     MED med_phases_prep_wav_avg
+     MED -> ATM :remapMethod=redist
+     MED -> ICE :remapMethod=redist
+     MED -> LND :remapMethod=redist
+     MED -> WAV :remapMethod=redist
+     ATM phase1
+     ATM -> CHM
+     CHM
+     CHM -> ATM
+     ATM phase2
+     ICE
+     WAV
+     LND
+     ATM -> MED :remapMethod=redist
+     MED med_phases_post_atm
+     ICE -> MED :remapMethod=redist
+     MED med_phases_post_ice
+     LND -> MED :remapMethod=redist
+     MED med_phases_post_lnd
+     WAV -> MED :remapMethod=redist
+     MED med_phases_post_wav
+     MED med_phases_ocnalb_run
+     MED med_phases_prep_ocn_accum
+   @
+   OCN -> MED :remapMethod=redist
+   MED med_phases_post_ocn
+   MED med_phases_restart_write
+@
+::
+
+# CMEPS variables
+
+DRIVER_attributes::
+::
+
+MED_attributes::
+      ATM_model = @[atm_model]
+      ICE_model = @[ice_model]
+      LND_model = @[lnd_model]
+      OCN_model = @[ocn_model]
+      WAV_model = @[wav_model]
+      coupling_mode = @[CPLMODE]
+      pio_rearranger = @[pio_rearranger]
+      ocean_albedo_limit = @[ocean_albedo_limit]
+::
+
+ALLCOMP_attributes::
+      ScalarFieldCount = 3
+      ScalarFieldIdxGridNX = 1
+      ScalarFieldIdxGridNY = 2
+      ScalarFieldIdxGridNTile = 3
+      ScalarFieldName = cpl_scalars
+      start_type = @[RUNTYPE]
+      restart_dir = @[CMEPS_RESTART_DIR]
+      case_name = ufs.cpld
+      restart_n = @[RESTART_N]
+      restart_option = nhours
+      restart_ymd = -999
+      dbug_flag = @[cap_dbug_flag]
+      stop_n = @[FHMAX]
+      stop_option = nhours
+      stop_ymd = -999
+      orb_eccen = 1.e36
+      orb_iyear = 2000
+      orb_iyear_align = 2000
+      orb_mode = fixed_year
+      orb_mvelp = 1.e36
+      orb_obliq = 1.e36
+::

tests/rt.conf

@@ -53,6 +53,9 @@ RUN | cpld_restart_c192_p8                              | - wcoss2 jet acorn s4
 RUN | cpld_bmark_p8                                     | - s4 jet acorn noaacloud             | baseline |
 RUN | cpld_restart_bmark_p8                             | - s4 jet acorn noaacloud             |          | cpld_bmark_p8
 
+COMPILE | s2swal | intel | -DAPP=S2SWAL -DCCPP_SUITES=FV3_GFS_v17_coupled_p8 | | fv3 |
+RUN | cpld_control_p8_lnd                               | - noaacloud                           | baseline |
+
 # Aerosol, no Wave
 RUN | cpld_s2sa_p8                                      | - noaacloud                          | baseline |