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call-gSNP v10.0.0-rc.2

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@yashpatel6 yashpatel6 released this 27 Jul 17:33
· 61 commits to main since this release
cce71e8

CHANGELOG

Added

  • Save tumor segmentation QC output from CalculateContamination

Changed

  • Set default compression for GATK IndelRealignment to 1
  • Make pipeline germline variant calling only

Removed

  • BAM processing steps