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Prep sample order input #174

Merged
merged 7 commits into from
Jun 27, 2024
Merged

Prep sample order input #174

merged 7 commits into from
Jun 27, 2024

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dan-knight
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Description

Sets up reusable functionality to validate the sample.order argument in some plotting functions. Additionally, this refactor allows the functionality to be unit-tested.

Checklist

  • This PR does NOT contain PHI or germline genetic data. A repo may need to be deleted if such data is uploaded. Disclosing PHI is a major problem.

  • This PR does NOT contain molecular files, compressed files, output files such as images (e.g. .png, .jpeg), .pdf, .RData, .xlsx, .doc, .ppt, or other non-plain-text files. To automatically exclude such files using a .gitignore file, see here for example.

  • I have read the code review guidelines and the code review best practice on GitHub check-list.

  • I have set up or verified the main branch protection rule following the github standards before opening this pull request.

  • The name of the branch is meaningful and well formatted following the standards, using [AD_username (or 5 letters of AD if AD is too long)]-[brief_description_of_branch].

  • I have added the major changes included in this pull request to the NEWS under the next release version or unreleased, and updated the date. I have also updated the version number in DESCRIPTION according to semantic versioning rules.

  • Both R CMD build and R CMD check run successfully.

@dan-knight dan-knight added the bug Something isn't working label Apr 2, 2024
@dan-knight dan-knight requested a review from a team as a code owner April 2, 2024 16:40
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@forbiddenpersimmon forbiddenpersimmon left a comment

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LGTM!

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@forbiddenpersimmon forbiddenpersimmon left a comment

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Still LGTM!

@dan-knight dan-knight merged commit 54fb8b7 into main Jun 27, 2024
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@dan-knight dan-knight deleted the sample-order branch June 27, 2024 20:59
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3 participants