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fix deprecation warning #11

Merged
merged 4 commits into from
Jan 15, 2024
Merged

fix deprecation warning #11

merged 4 commits into from
Jan 15, 2024

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n-kall
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@n-kall n-kall commented Jan 15, 2024

changes jacobian_adjustment to jacobian to fix deprecation warning

topipa
topipa approved these changes Jan 15, 2024
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Thank you 👍

@topipa topipa merged commit 64f7f6f into topipa:main Jan 15, 2024
5 of 8 checks passed
n-kall added a commit to n-kall/iwmm that referenced this pull request Jan 18, 2024
@n-kall
Posterior updates (#7)
40244e5 
* address changes to unconstrain_draws in cmdstanr, posterior pareto-k

* use posterior github version in workflow

* fix workflow deps

* fix deprecation warning (topipa#11)

* add return_k = TRUE for pareto smoothing

* change jacobian_adjustment to jacobian (deprecation warning)

---------

Co-authored-by: n-kall <[email protected]>

---------

Co-authored-by: n-kall <[email protected]>
topipa added a commit that referenced this pull request Mar 25, 2024
@n-kall @topipa
Brmsfit method (#12)
946b7f6 
* add return_k = TRUE for pareto smoothing

* address changes to unconstrain_draws in cmdstanr, posterior pareto-k

* use posterior github version in workflow

* fix workflow deps

* change jacobian_adjustment to jacobian (deprecation warning)

* Posterior updates (#7)

* address changes to unconstrain_draws in cmdstanr, posterior pareto-k

* use posterior github version in workflow

* fix workflow deps

* fix deprecation warning (#11)

* add return_k = TRUE for pareto smoothing

* change jacobian_adjustment to jacobian (deprecation warning)

---------

Co-authored-by: n-kall <[email protected]>

---------

Co-authored-by: n-kall <[email protected]>

* updates to constrain/unconstrain methods

* fixes to brmsfit method

* docs update

* fix namespace warnings

* fix namespace issues

* add dummy sampler_params function for brmsfit

---------

Co-authored-by: n-kall <[email protected]>
Co-authored-by: Topi Paananen <[email protected]>
topipa added a commit that referenced this pull request Mar 31, 2024
@topipa @n-kall
Brmsfit method (#14)
b40fdc3 
* add more methods

* add basic brmsfit method

* small changes to brmsfit method

* add print function

* small updates

* add return_k = TRUE for pareto smoothing

* address changes to unconstrain_draws in cmdstanr, posterior pareto-k

* use posterior github version in workflow

* fix workflow deps

* change jacobian_adjustment to jacobian (deprecation warning)

* Posterior updates (#7)

* address changes to unconstrain_draws in cmdstanr, posterior pareto-k

* use posterior github version in workflow

* fix workflow deps

* fix deprecation warning (#11)

* add return_k = TRUE for pareto smoothing

* change jacobian_adjustment to jacobian (deprecation warning)

---------

Co-authored-by: n-kall <[email protected]>

---------

Co-authored-by: n-kall <[email protected]>

* updates to constrain/unconstrain methods

* fixes to brmsfit method

* docs update

* fix namespace warnings

* fix namespace issues

* add dummy sampler_params function for brmsfit

* Brmsfit method (#12)

* add return_k = TRUE for pareto smoothing

* address changes to unconstrain_draws in cmdstanr, posterior pareto-k

* use posterior github version in workflow

* fix workflow deps

* change jacobian_adjustment to jacobian (deprecation warning)

* Posterior updates (#7)

* address changes to unconstrain_draws in cmdstanr, posterior pareto-k

* use posterior github version in workflow

* fix workflow deps

* fix deprecation warning (#11)

* add return_k = TRUE for pareto smoothing

* change jacobian_adjustment to jacobian (deprecation warning)

---------

Co-authored-by: n-kall <[email protected]>

---------

Co-authored-by: n-kall <[email protected]>

* updates to constrain/unconstrain methods

* fixes to brmsfit method

* docs update

* fix namespace warnings

* fix namespace issues

* add dummy sampler_params function for brmsfit

---------

Co-authored-by: n-kall <[email protected]>
Co-authored-by: Topi Paananen <[email protected]>

* run styler

* run styler again

* add return statement

* no parallel tests by default

* document

* remove unneeded import

* clean blank lines

* name log weights appropriately

* name log weights

* document

---------

Co-authored-by: n-kall <[email protected]>
Co-authored-by: n-kall <[email protected]>
n-kall added a commit to n-kall/iwmm that referenced this pull request Apr 10, 2024
@n-kall @topipa
Brmsfit method (topipa#14) (#9)
2587ca6 
* add more methods

* add basic brmsfit method

* small changes to brmsfit method

* add print function

* small updates

* add return_k = TRUE for pareto smoothing

* address changes to unconstrain_draws in cmdstanr, posterior pareto-k

* use posterior github version in workflow

* fix workflow deps

* change jacobian_adjustment to jacobian (deprecation warning)

* Posterior updates (#7)

* address changes to unconstrain_draws in cmdstanr, posterior pareto-k

* use posterior github version in workflow

* fix workflow deps

* fix deprecation warning (topipa#11)

* add return_k = TRUE for pareto smoothing

* change jacobian_adjustment to jacobian (deprecation warning)

---------



---------



* updates to constrain/unconstrain methods

* fixes to brmsfit method

* docs update

* fix namespace warnings

* fix namespace issues

* add dummy sampler_params function for brmsfit

* Brmsfit method (topipa#12)

* add return_k = TRUE for pareto smoothing

* address changes to unconstrain_draws in cmdstanr, posterior pareto-k

* use posterior github version in workflow

* fix workflow deps

* change jacobian_adjustment to jacobian (deprecation warning)

* Posterior updates (#7)

* address changes to unconstrain_draws in cmdstanr, posterior pareto-k

* use posterior github version in workflow

* fix workflow deps

* fix deprecation warning (topipa#11)

* add return_k = TRUE for pareto smoothing

* change jacobian_adjustment to jacobian (deprecation warning)

---------



---------



* updates to constrain/unconstrain methods

* fixes to brmsfit method

* docs update

* fix namespace warnings

* fix namespace issues

* add dummy sampler_params function for brmsfit

---------




* run styler

* run styler again

* add return statement

* no parallel tests by default

* document

* remove unneeded import

* clean blank lines

* name log weights appropriately

* name log weights

* document

---------

Co-authored-by: Topi Paananen <[email protected]>
Co-authored-by: n-kall <[email protected]>
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@n-kall @topipa