benchmark update

taxonomicallyinformedannotation · Jul 23, 2023 · 292fb3f · 292fb3f
1 parent 00ad552
commit 292fb3f
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Showing 6 changed files with 6 additions and 6 deletions.
diff --git a/inst/scripts/annotate_spectra.R b/inst/scripts/annotate_spectra.R
@@ -15,7 +15,7 @@ log_debug(
 log_debug("Authors: ", crayon::green("AR"), "\n")
 log_debug("Contributors: ...")
 
-targets::tar_make(names = matches("ann_spe_is_l"))
+targets::tar_make(names = matches("^ann_spe_is_l"))
 
 end <- Sys.time()
 

diff --git a/inst/scripts/prepare_annotations_gnps.R b/inst/scripts/prepare_annotations_gnps.R
@@ -12,7 +12,7 @@ log_debug(
 log_debug("Authors: ", crayon::green("AR"), "\n")
 log_debug("Contributors: ...")
 
-targets::tar_make(names = matches("ann_spe_exp_gnp_pre"))
+targets::tar_make(names = matches("^ann_spe_exp_gnp_pre"))
 
 end <- Sys.time()
 

diff --git a/inst/scripts/prepare_annotations_sirius.R b/inst/scripts/prepare_annotations_sirius.R
@@ -12,7 +12,7 @@ log_debug(
 log_debug("Authors: ", crayon::green("AR"), "\n")
 log_debug("Contributors: ...")
 
-targets::tar_make(names = matches("ann_sir_pre"))
+targets::tar_make(names = matches("^ann_sir_pre"))
 
 end <- Sys.time()
 

diff --git a/inst/scripts/prepare_annotations_spectra.R b/inst/scripts/prepare_annotations_spectra.R
@@ -13,7 +13,7 @@ log_debug("Authors: ", crayon::green("AR"), "\n")
 log_debug("Contributors: ...")
 
 ## Not ann_spe because of `ann_spe_int` (see #69)
-targets::tar_make(names = c(matches("ann_spe_is")))
+targets::tar_make(names = c(matches("^ann_spe_is")))
 
 end <- Sys.time()
 

diff --git a/inst/scripts/tima_full.R b/inst/scripts/tima_full.R
@@ -8,7 +8,7 @@ log_debug(
 )
 log_debug("Authors: ", crayon::green("AR"), "\n")
 
-targets::tar_make(names = matches("ann_pre_crazy"))
+targets::tar_make(names = matches("^ann_pre_crazy"))
 
 end <- Sys.time()
 

diff --git a/inst/scripts/tima_mini.R b/inst/scripts/tima_mini.R
@@ -9,7 +9,7 @@ log_debug(
 log_debug("Authors: ", crayon::green("AR"), "\n")
 log_debug("Contributors: ", crayon::blue("PMA"), "\n")
 
-targets::tar_make(names = matches("ann_pre$"))
+targets::tar_make(names = matches("^ann_pre$"))
 
 end <- Sys.time()