tripal_phylotree

A tripal module for Chado phylogeny tables, developed for http://legumeinfo.org/

Requirements

• Tripal 2 http://tripal.info/
• Chado http://gmod.org/wiki/Chado_Phylogeny_Module
• Drupal 7 https://www.drupal.org/

Quickstart

• git clone repos into drupal/sites/all/modules/tripal
• drush pm-enable tripal_phylotree (or enable via drupal ui admin interface)
• see in browser admin/modules, and enable tripal_phylotree permissions: add 'View Phylotree' permission to all Roles add 'Administer Phylotree' permission to Admin role(s)
• see in browser admin/tripal/extension/tripal_phylotree, go to Sync tab
• sync phylotrees
• sync organisms
• sync features of type = 'polypeptide'
• default view for searching and browsing is chado/phylotree