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30 Open 14 Closed
30 Open 14 Closed
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Issues list

batch corrupt xml-tagged corpus
#54 opened Dec 21, 2019 by source-data
Prediction engine with batched examples
#53 opened Dec 21, 2019 by source-data
train a single context model for roles of both geneprod and small_molecule
#52 opened Sep 4, 2019 by source-data
check new catstack/embedding models in smtag-web
#51 opened Sep 4, 2019 by source-data
Train specific model on patient as assayed species
#50 opened Sep 1, 2019 by source-data
Inject organisms from list to replace tagged organisms
#49 opened Sep 1, 2019 by source-data
Compare side-by-side unet without embedding and catstack embedding with main catstack
#48 opened Sep 1, 2019 by source-data
Try rare probabilitic masking to reinforce context-dependency
#47 opened Sep 1, 2019 by source-data
2
save best model when training
#45 opened Aug 25, 2019 by source-data
increase specificity by embeddig dataset in large 'decoy' dataset
#44 opened Aug 25, 2019 by source-data
3
add ReLU after compression in embedding CatStack
#43 opened Aug 11, 2019 by source-data
problem with option -p and finding rack (branch: multiconv) bug Something isn't working
#41 opened Aug 7, 2019 by source-data
5
check if anonymization character needs to be the same or not in vsearch and py-smtag
#40 opened Aug 7, 2019 by source-data
1
compress output of CatStack to make more compact embeddings
#39 opened Aug 4, 2019 by source-data
1
Use Redis Celery for data prep
#38 opened Aug 4, 2019 by source-data
2
test value of attention in determinant/article embeddings
#37 opened Aug 4, 2019 by source-data
train all models with pmc article/det compressed embeddings
#36 opened Jul 31, 2019 by source-data
2
test OCR again with main CatStack
#35 opened Jul 23, 2019 by source-data
Data augmentation for entity recognition
#34 opened Jul 23, 2019 by source-data
Optimize main CatStack layers
#33 opened Jul 23, 2019 by source-data
train CatStack embeddings on very large dataset
#32 opened Jul 23, 2019 by source-data
4
find conditions to use OCR info
#31 opened Jul 23, 2019 by source-data
2
compare verb-prediction to simple shuffle embeddings
#30 opened Jul 23, 2019 by source-data
4
production directory expected but not installed bug Something isn't working
#28 opened Jul 20, 2019 by source-data
add multihead attention to main CatStack
#26 opened Jul 20, 2019 by source-data
2
ProTip! Exclude everything labeled bug with -label:bug.