slurmConfig can have additional parameters after the main config string.

remindmodel · Aug 2, 2022 · b2c2ea6 · b2c2ea6
1 parent 2d10695
commit b2c2ea6
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/scripts/start/submit.R b/scripts/start/submit.R
@@ -69,7 +69,7 @@ submit <- function(cfg, restart = FALSE, stopOnFolderCreateError = TRUE) {
 
   # send prepare_and_run.R to cluster 
   cat("   Executing prepare_and_run.R for",cfg$results_folder,"\n")
-  if(cfg$slurmConfig=="direct") {
+  if (grepl("^direct", cfg$slurmConfig)) {
     log <- format(Sys.time(), paste0(cfg$title,"-%Y-%H-%M-%S-%OS3.log"))
     system("Rscript prepare_and_run.R")
   } else {