Skip to content

Commit

Permalink
Merge branch 'main' into test_plot_typing
Browse files Browse the repository at this point in the history
  • Loading branch information
Illviljan committed Apr 5, 2024
2 parents 8805da3 + 56182f7 commit 6b964c0
Show file tree
Hide file tree
Showing 20 changed files with 518 additions and 42 deletions.
11 changes: 5 additions & 6 deletions .github/workflows/ci-additional.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -35,14 +35,13 @@ jobs:
runs-on: "ubuntu-latest"
needs: detect-ci-trigger
if: needs.detect-ci-trigger.outputs.triggered == 'false'

defaults:
run:
shell: bash -l {0}

env:
CONDA_ENV_FILE: ci/requirements/environment.yml
PYTHON_VERSION: "3.11"

steps:
- uses: actions/checkout@v4
with:
Expand Down Expand Up @@ -128,7 +127,7 @@ jobs:
python -m mypy --install-types --non-interactive --cobertura-xml-report mypy_report xarray/
- name: Upload mypy coverage to Codecov
uses: codecov/[email protected].0
uses: codecov/[email protected].1
with:
file: mypy_report/cobertura.xml
flags: mypy
Expand Down Expand Up @@ -182,7 +181,7 @@ jobs:
python -m mypy --install-types --non-interactive --cobertura-xml-report mypy_report xarray/
- name: Upload mypy coverage to Codecov
uses: codecov/[email protected].0
uses: codecov/[email protected].1
with:
file: mypy_report/cobertura.xml
flags: mypy39
Expand Down Expand Up @@ -243,7 +242,7 @@ jobs:
python -m pyright xarray/
- name: Upload pyright coverage to Codecov
uses: codecov/[email protected].0
uses: codecov/[email protected].1
with:
file: pyright_report/cobertura.xml
flags: pyright
Expand Down Expand Up @@ -302,7 +301,7 @@ jobs:
python -m pyright xarray/
- name: Upload pyright coverage to Codecov
uses: codecov/[email protected].0
uses: codecov/[email protected].1
with:
file: pyright_report/cobertura.xml
flags: pyright39
Expand Down
10 changes: 9 additions & 1 deletion .github/workflows/ci.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -127,6 +127,14 @@ jobs:
run: |
python -c "import xarray"
- name: Restore cached hypothesis directory
uses: actions/cache@v4
with:
path: .hypothesis/
key: cache-hypothesis
enableCrossOsArchive: true
save-always: true

- name: Run tests
run: python -m pytest -n 4
--timeout 180
Expand All @@ -143,7 +151,7 @@ jobs:
path: pytest.xml

- name: Upload code coverage to Codecov
uses: codecov/[email protected].0
uses: codecov/[email protected].1
with:
file: ./coverage.xml
flags: unittests
Expand Down
102 changes: 102 additions & 0 deletions .github/workflows/hypothesis.yaml
Original file line number Diff line number Diff line change
@@ -0,0 +1,102 @@
name: Slow Hypothesis CI
on:
push:
branches:
- "main"
pull_request:
branches:
- "main"
types: [opened, reopened, synchronize, labeled]
schedule:
- cron: "0 0 * * *" # Daily “At 00:00” UTC
workflow_dispatch: # allows you to trigger manually

jobs:
detect-ci-trigger:
name: detect ci trigger
runs-on: ubuntu-latest
if: |
github.repository == 'pydata/xarray'
&& (github.event_name == 'push' || github.event_name == 'pull_request')
outputs:
triggered: ${{ steps.detect-trigger.outputs.trigger-found }}
steps:
- uses: actions/checkout@v4
with:
fetch-depth: 2
- uses: xarray-contrib/ci-trigger@v1
id: detect-trigger
with:
keyword: "[skip-ci]"

hypothesis:
name: Slow Hypothesis Tests
runs-on: "ubuntu-latest"
needs: detect-ci-trigger
if: |
always()
&& (
(github.event_name == 'schedule' || github.event_name == 'workflow_dispatch')
|| needs.detect-ci-trigger.outputs.triggered == 'true'
|| contains( github.event.pull_request.labels.*.name, 'run-slow-hypothesis')
)
defaults:
run:
shell: bash -l {0}

env:
CONDA_ENV_FILE: ci/requirements/environment.yml
PYTHON_VERSION: "3.12"

steps:
- uses: actions/checkout@v4
with:
fetch-depth: 0 # Fetch all history for all branches and tags.

- name: set environment variables
run: |
echo "TODAY=$(date +'%Y-%m-%d')" >> $GITHUB_ENV
- name: Setup micromamba
uses: mamba-org/setup-micromamba@v1
with:
environment-file: ci/requirements/environment.yml
environment-name: xarray-tests
create-args: >-
python=${{env.PYTHON_VERSION}}
pytest-reportlog
cache-environment: true
cache-environment-key: "${{runner.os}}-${{runner.arch}}-py${{env.PYTHON_VERSION}}-${{env.TODAY}}-${{hashFiles(env.CONDA_ENV_FILE)}}"

- name: Install xarray
run: |
python -m pip install --no-deps -e .
- name: Version info
run: |
conda info -a
conda list
python xarray/util/print_versions.py
- name: Restore cached hypothesis directory
uses: actions/cache@v4
with:
path: .hypothesis/
key: cache-hypothesis
enableCrossOsArchive: true
save-always: true
- name: Run slow Hypothesis tests
if: success()
id: status
run: |
python -m pytest --hypothesis-show-statistics --run-slow-hypothesis properties/*.py \
--report-log output-${{ matrix.python-version }}-log.jsonl
- name: Generate and publish the report
if: |
failure()
&& steps.status.outcome == 'failure'
&& github.event_name == 'schedule'
&& github.repository_owner == 'pydata'
uses: xarray-contrib/issue-from-pytest-log@v1
with:
log-path: output-${{ matrix.python-version }}-log.jsonl
issue-title: "Nightly Hypothesis tests failed"
issue-label: "topic-hypothesis"
2 changes: 1 addition & 1 deletion .github/workflows/upstream-dev-ci.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -143,7 +143,7 @@ jobs:
run: |
python -m mypy --install-types --non-interactive --cobertura-xml-report mypy_report
- name: Upload mypy coverage to Codecov
uses: codecov/[email protected].0
uses: codecov/[email protected].1
with:
file: mypy_report/cobertura.xml
flags: mypy
Expand Down
8 changes: 4 additions & 4 deletions .pre-commit-config.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -13,24 +13,24 @@ repos:
- id: mixed-line-ending
- repo: https://github.com/astral-sh/ruff-pre-commit
# Ruff version.
rev: 'v0.2.0'
rev: 'v0.3.4'
hooks:
- id: ruff
args: ["--fix", "--show-fixes"]
# https://github.com/python/black#version-control-integration
- repo: https://github.com/psf/black-pre-commit-mirror
rev: 24.1.1
rev: 24.3.0
hooks:
- id: black-jupyter
- repo: https://github.com/keewis/blackdoc
rev: v0.3.9
hooks:
- id: blackdoc
exclude: "generate_aggregations.py"
additional_dependencies: ["black==24.1.1"]
additional_dependencies: ["black==24.3.0"]
- id: blackdoc-autoupdate-black
- repo: https://github.com/pre-commit/mirrors-mypy
rev: v1.8.0
rev: v1.9.0
hooks:
- id: mypy
# Copied from setup.cfg
Expand Down
21 changes: 21 additions & 0 deletions doc/whats-new.rst
Original file line number Diff line number Diff line change
Expand Up @@ -15,6 +15,27 @@ What's New
np.random.seed(123456)
.. _whats-new.2024.04.0:

v2024.04.0 (unreleased)
-----------------------

New Features
~~~~~~~~~~~~


Breaking changes
~~~~~~~~~~~~~~~~


Bug fixes
~~~~~~~~~


Internal Changes
~~~~~~~~~~~~~~~~


.. _whats-new.2024.03.0:

v2024.03.0 (Mar 29, 2024)
Expand Down
21 changes: 21 additions & 0 deletions properties/conftest.py
Original file line number Diff line number Diff line change
@@ -1,3 +1,24 @@
import pytest


def pytest_addoption(parser):
parser.addoption(
"--run-slow-hypothesis",
action="store_true",
default=False,
help="run slow hypothesis tests",
)


def pytest_collection_modifyitems(config, items):
if config.getoption("--run-slow-hypothesis"):
return
skip_slow_hyp = pytest.mark.skip(reason="need --run-slow-hypothesis option to run")
for item in items:
if "slow_hypothesis" in item.keywords:
item.add_marker(skip_slow_hyp)


try:
from hypothesis import settings
except ImportError:
Expand Down
Loading

0 comments on commit 6b964c0

Please sign in to comment.