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fix read.snapshot documentation, read entire snapshot if grep goes wrong #80

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Oct 20, 2023
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2 changes: 1 addition & 1 deletion .buildlibrary
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
ValidationKey: '614443879'
ValidationKey: '614494800'
AcceptedWarnings:
- 'Warning: package ''.*'' was built under R version'
- 'Warning: namespace ''.*'' is not available and has been replaced'
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4 changes: 2 additions & 2 deletions CITATION.cff
Original file line number Diff line number Diff line change
Expand Up @@ -2,8 +2,8 @@ cff-version: 1.2.0
message: If you use this software, please cite it using the metadata from this file.
type: software
title: 'quitte: Bits and pieces of code to use with quitte-style data frames'
version: 0.3127.1
date-released: '2023-10-19'
version: 0.3127.2
date-released: '2023-10-20'
abstract: A collection of functions for easily dealing with quitte-style data frames,
doing multi-model comparisons and plots.
authors:
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4 changes: 2 additions & 2 deletions DESCRIPTION
Original file line number Diff line number Diff line change
@@ -1,8 +1,8 @@
Type: Package
Package: quitte
Title: Bits and pieces of code to use with quitte-style data frames
Version: 0.3127.1
Date: 2023-10-19
Version: 0.3127.2
Date: 2023-10-20
Authors@R: c(
person("Michaja", "Pehl", , "[email protected]", role = c("aut", "cre")),
person("Nico", "Bauer", , "[email protected]", role = "aut"),
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2 changes: 1 addition & 1 deletion R/read.snapshot.R
Original file line number Diff line number Diff line change
Expand Up @@ -43,7 +43,7 @@ read.snapshot <- function(file, keep = list(), filter.function = NULL) {
ignore.stdout = TRUE, ignore.stderr = TRUE))
if (any(0 != exitcodes)) {
stop(paste(paste0('`', testcommand[0 != exitcodes], '`', collapse = ', '),
"are not available system commands, please use 'read.quitte'."))
"are not available system commands, please only use 'filter.function' for filtering."))
}
# always keep first lines of original file (comments, colnames), grep in the rest
alwayskeep <- 20
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6 changes: 3 additions & 3 deletions README.md
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
# Bits and pieces of code to use with quitte-style data frames

R package **quitte**, version **0.3127.1**
R package **quitte**, version **0.3127.2**

[![CRAN status](https://www.r-pkg.org/badges/version/quitte)](https://cran.r-project.org/package=quitte) [![R build status](https://github.com/pik-piam/quitte/workflows/check/badge.svg)](https://github.com/pik-piam/quitte/actions) [![codecov](https://codecov.io/gh/pik-piam/quitte/branch/master/graph/badge.svg)](https://app.codecov.io/gh/pik-piam/quitte) [![r-universe](https://pik-piam.r-universe.dev/badges/quitte)](https://pik-piam.r-universe.dev/builds)

Expand Down Expand Up @@ -47,7 +47,7 @@ In case of questions / problems please contact Michaja Pehl <michaja.pehl@pik-po

To cite package **quitte** in publications use:

Pehl M, Bauer N, Hilaire J, Levesque A, Luderer G, Schultes A, Dietrich J, Richters O (2023). _quitte: Bits and pieces of code to use with quitte-style data frames_. R package version 0.3127.1, <URL: https://github.com/pik-piam/quitte>.
Pehl M, Bauer N, Hilaire J, Levesque A, Luderer G, Schultes A, Dietrich J, Richters O (2023). _quitte: Bits and pieces of code to use with quitte-style data frames_. R package version 0.3127.2, <URL: https://github.com/pik-piam/quitte>.

A BibTeX entry for LaTeX users is

Expand All @@ -56,7 +56,7 @@ A BibTeX entry for LaTeX users is
title = {quitte: Bits and pieces of code to use with quitte-style data frames},
author = {Michaja Pehl and Nico Bauer and Jérôme Hilaire and Antoine Levesque and Gunnar Luderer and Anselm Schultes and Jan Philipp Dietrich and Oliver Richters},
year = {2023},
note = {R package version 0.3127.1},
note = {R package version 0.3127.2},
url = {https://github.com/pik-piam/quitte},
}
```
8 changes: 6 additions & 2 deletions man/read.snapshot.Rd

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