Repositories list

• SGDBackend-Nex2

  Public
  A restful web service for the Saccharomyces Genome Database (SGD)

  Python

  •

  MIT License

  •5•5•5•13•Updated Oct 2, 2024Oct 2, 2024

• SGDFrontend

  Public
  Front-end code for SGD

  JavaScript

  •

  MIT License

  •3•10•0•21•Updated Jul 25, 2024Jul 25, 2024

• yeastmine-bio-sources

  Public
  SGD specific data sources that are loaded into YeastMine.

  Java

  •0•0•0•0•Updated May 2, 2024May 2, 2024

• yeastmine

  Public
  Java

  •0•1•0•1•Updated May 2, 2024May 2, 2024

• BlastDocker

  Public
  Python

  •0•0•0•0•Updated Apr 11, 2024Apr 11, 2024

• GoToolsDocker

  Public
  Perl

  •0•0•0•0•Updated Feb 21, 2024Feb 21, 2024

• PatmatchDocker

  Public
  Python

  •0•0•0•0•Updated Nov 16, 2023Nov 16, 2023

• SGDFrontendDocker

  Public
  JavaScript

  •

  MIT License

  •0•0•0•0•Updated Oct 13, 2023Oct 13, 2023

• yeastgfp-docker

  Public
  Yeast GFP Fusion Localization Database

  PHP

  •0•0•0•0•Updated Oct 13, 2023Oct 13, 2023

• SGDBackendDocker

  Public
  A restful web service for the Saccharomyces Genome Database (SGD)

  Python

  •

  MIT License

  •1•0•0•0•Updated Oct 5, 2023Oct 5, 2023

• yplp-docker

  Public
  Yeast Protein LocalizationPlus Database, YPL+.db

  PHP

  •0•0•0•0•Updated Sep 20, 2023Sep 20, 2023

• sgd_visualization

  Public
  some React components for genomic data visualization

  JavaScript

  •

  MIT License

  •0•3•1•21•Updated Jun 19, 2023Jun 19, 2023

• SGDAllianceData

  Public
  Python

  •

  MIT License

  •1•1•0•16•Updated Feb 15, 2023Feb 15, 2023

• SGD_Orchestra

  Public
  SGD Containerization repository

  Python

  •0•0•0•5•Updated Jan 24, 2023Jan 24, 2023

• sgd_yeastmine_builder

  Public
  Shell

  •

  MIT License

  •0•0•0•0•Updated May 20, 2022May 20, 2022

• yeastmine-docker

  Public
  Java

  •0•0•0•0•Updated Nov 10, 2021Nov 10, 2021

• SGD_Tools

  Public
  SGD in-house automation apps/scripts

  Python

  •

  MIT License

  •1•0•0•0•Updated Aug 20, 2020Aug 20, 2020

• alliancemine

  Public
  Testing

  Java

  •0•0•0•0•Updated Jul 13, 2020Jul 13, 2020

• alliancemine-bio-sources

  Public
  Java

  •0•0•0•0•Updated May 28, 2020May 28, 2020

• react-sigma-graph

  Public
  a react component to easily make sigma graph visualizations

  JavaScript

  •

  MIT License

  •2•5•0•0•Updated Oct 10, 2019Oct 10, 2019

• intermine-ym-legacy

  Public
  A powerful open source data warehouse system

  Java

  •

  Other

  •348•0•0•0•Updated Jul 30, 2019Jul 30, 2019

• sgd_api_examples

  Public
  This is a collection of python scripts which demonstrate how to access data from the SGD API.

  0•3•0•0•Updated Aug 10, 2018Aug 10, 2018

• AGR_POC

  Public
  This project will showcase how model organism community outside AGR could inexpensively take the AGR software and launch a website with their own data.

  JavaScript

  •0•0•0•0•Updated Apr 4, 2018Apr 4, 2018

• AGAPE

  Public
  AGAPE (Automated Genome Analysis PipelinE) for yeast pan-genome analysis

  C

  •9•3•4•0•Updated Jan 18, 2018Jan 18, 2018

• CDN

  Public
  JavaScript, Cascading Style Sheet Content Delivery Network

  JavaScript

  •25•0•0•0•Updated Jun 12, 2017Jun 12, 2017

• SGDBackend

  Public
  LEGACY CODE; NOT MAINTAINED

  Python

  •1•3•0•0•Updated Dec 19, 2016Dec 19, 2016

• sgd_react_boilerplate

  Public
  An example react application used by SGD.

  JavaScript

  •

  MIT License

  •6•0•0•0•Updated Nov 28, 2016Nov 28, 2016

• sgd_aws

  Public
  SGD in AWS

  Python

  •0•1•0•0•Updated Jan 13, 2016Jan 13, 2016

• biojs-vis-protein-viewer

  Public
  Displays protein domains

  JavaScript

  •

  MIT License

  •1•0•0•0•Updated Apr 21, 2015Apr 21, 2015

• multi_sequence_alignment_viewer

  Public
  a react.js component to visualize alignment of multiple sequences

  JavaScript

  •0•0•0•0•Updated Nov 21, 2014Nov 21, 2014