Repositories list

• heinz

  Public
  Single species module discovery

  C++

  •

  MIT License

  •8•13•9•0•Updated Oct 18, 2022Oct 18, 2022

• eXamine

  Public
  eXamine is a Cytoscape app for a set-oriented visual analysis approach for annotated modules that displays set membership as contours on top of a node-link layout.

  Java

  •

  GNU General Public License v2.0

  •6•3•5•0•Updated Aug 30, 2022Aug 30, 2022

• yoshiko

  Public
  (Weighted) Cluster Editing

  C++

  •

  MIT License

  •2•4•23•0•Updated Nov 10, 2021Nov 10, 2021

• natalie

  Public
  Global pairwise network alignment

  C++

  •

  MIT License

  •0•4•0•0•Updated May 25, 2016May 25, 2016

• lana

  Public
  Pairwise local network alignment by enumerating common subgraphs

  C++

  •

  MIT License

  •0•0•0•0•Updated Oct 20, 2015Oct 20, 2015

• xheinz

  Public
  Cross-species module discovery

  C++

  •

  MIT License

  •2•3•0•0•Updated Jun 15, 2015Jun 15, 2015

• fragments

  Public
  TeX

  •

  MIT License

  •0•0•0•0•Updated May 18, 2015May 18, 2015

• heinz-app

  Public
  Cytoscape 3.x app for Heinz

  Java

  •

  GNU General Public License v2.0

  •0•0•0•0•Updated Apr 29, 2015Apr 29, 2015

• JRF

  Public
  implementation of generalized Robinson-Foulds metric for comparing trees

  C++

  •

  MIT License

  •0•2•0•0•Updated Feb 11, 2015Feb 11, 2015

• yoshiko-app

  Public
  Cytoscape 3.x app for yoshiko

  Java

  •

  GNU General Public License v2.0

  •1•0•0•0•Updated Sep 7, 2014Sep 7, 2014