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@NeurodataWithoutBorders Neurodata Without Borders

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    33 repositories

    • matnwb

      Public
      A Matlab interface for reading and writing NWB files
      HTML
      •
      BSD 2-Clause "Simplified" License
      •32•50•49•11•Updated Oct 16, 2024Oct 16, 2024

    • nwb-project-analytics

      Public
      Repository for collecting analytics and scripts related to the NWB project.
      Jupyter Notebook
      •
      Other
      •1•1•10•0•Updated Oct 16, 2024Oct 16, 2024

    • nwbinspector

      Public
      Tool to help inspect NWB files for compliance with NWB Best Practices
      nwb
      Python
      •
      Other
      •10•17•52•14•Updated Oct 14, 2024Oct 14, 2024

    • pynwb

      Public
      A Python API for working with Neurodata stored in the NWB Format
      pythonopen-sourcecross-platformreproducible-researchneuroscienceopen-dataopen-sciencehdf5nwbdata-format
      Python
      •
      Other
      •84•176•240•30•Updated Oct 14, 2024Oct 14, 2024

    • lindi

      Public
      Linked Data Interface (LINDI) - cloud-friendly access to NWB data
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •1•2•15•1•Updated Oct 14, 2024Oct 14, 2024

    • nwbwidgets

      Public
      Explore the hierarchical structure of NWB 2.0 files and visualize data with Jupyter widgets.
      visualizationpythonjupyterjupyter-notebooknwb
      Python
      •
      Other
      •21•48•47•17•Updated Oct 14, 2024Oct 14, 2024

    • nwb-guide

      Public
      NWB GUIDE is a desktop app that provides a no-code user interface for converting neurophysiology data to NWB.
      JavaScript
      •
      MIT License
      •4•22•16•4•Updated Oct 14, 2024Oct 14, 2024

    • nwb_benchmarks

      Public
      Benchmarking for NWB-related operations.
      Python
      •
      Other
      •1•4•18•1•Updated Oct 14, 2024Oct 14, 2024

    • nwb-website

      Public
      HTML
      •2•0•0•0•Updated Oct 12, 2024Oct 12, 2024

    • nwb_hackathons

      Public
      Repository for collecting materials from nwb hackathons
      pythonopen-sourcehackathonreproducible-researchneuroscienceopen-sciencehdf5nwbhdfinternational-conference
      Jupyter Notebook
      •85•22•1•0•Updated Oct 9, 2024Oct 9, 2024

    • aqnwb

      Public
      A C++ API for data acquisition using the NWB Format
      C++
      •
      Other
      •0•3•44•3•Updated Oct 2, 2024Oct 2, 2024

    • nwb-schema

      Public
      Data format specification schema for the NWB neurophysiology data format
      open-sourceschemaopen-dataopen-sciencenwbdata-formatnwb-nneurodata-without-borders
      Other
      •16•53•87•7•Updated Oct 2, 2024Oct 2, 2024

    • nwb-overview

      Public
      Introduction to NWB software
      8•7•35•3•Updated Sep 30, 2024Sep 30, 2024

    • nwb-format

      Public
      Record Engine plugin that streams data to Neurodata Without Borders format
      C
      •5•0•0•0•Updated Sep 11, 2024Sep 11, 2024

    • nwb-schema-language

      Public
      The specification language for Neurodata Without Borders
      Python
      •
      Other
      •2•1•6•1•Updated Sep 9, 2024Sep 9, 2024

    • helpdesk

      Public
      A collaborative communication forum for the NWB community to ask questions, talk about NWB, and track help tickets from users.
      BSD 3-Clause "New" or "Revised" License
      •0•4•0•0•Updated Feb 5, 2024Feb 5, 2024

    • ccf-widget

      Public
      Python
      •
      MIT License
      •3•5•9•2•Updated Nov 21, 2022Nov 21, 2022

    • nwb_tutorial

      Public
      Tutorials for learning NWB
      Jupyter Notebook
      •18•16•2•0•Updated Oct 3, 2022Oct 3, 2022

    • ndx-labmetadata-example

      Public
      Example extension to illustrate how to extend LabMetaData for adding lab-specific metadata
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•2•0•Updated Sep 23, 2022Sep 23, 2022

    • OpenEphysHDF5Lib

      Public
      A common library for all formats that write HDF5 files
      C
      •3•0•0•0•Updated Aug 9, 2022Aug 9, 2022

    • dandi-example-live-scripts

      Public
      Example MATLAB live scripts that use NWB data from DANDI
      0•0•0•0•Updated Aug 9, 2022Aug 9, 2022

    • nwb-tools

      Public
      Command-line tools for interacting with NWB files.
      Python
      •
      Other
      •0•0•2•0•Updated Sep 23, 2021Sep 23, 2021

    • ontology-project

      Public
      A place for specing out ontologies for NWB
      Other
      •2•1•1•1•Updated Jun 7, 2021Jun 7, 2021

    • neurodatawithoutborders.github.io

      Public
      HTML
      •9•3•0•0•Updated Apr 19, 2021Apr 19, 2021

    • pynwb-course

      Public
      Interactive Python course for using the Neurodata Without Borders format
      CSS
      •
      Other
      •2•14•3•0•Updated May 20, 2019May 20, 2019

    • diff

      Public
      Python script that compares two HDF5 files.
      Python
      •11•11•0•3•Updated Feb 27, 2019Feb 27, 2019

    • staged-recipes

      Public
      A place to submit conda recipes before they become fully fledged conda-forge feedstocks
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •4.9k•0•0•0•Updated Nov 11, 2017Nov 11, 2017

    • api-python

      Public archive
      [DEPRECATED] Python API for NWB < 2.0
      Python
      •
      Other
      •14•28•11•0•Updated Jun 19, 2017Jun 19, 2017

    • exp2nwb

      Public archive
      Practical conversion of experimental neurophysiology data to the NWB format
      Python
      •3•0•4•0•Updated May 12, 2017May 12, 2017

    • mat2nwb

      Public
      Conversion of Svoboda lab MATLAB files to NWB format.
      Python
      •6•5•0•0•Updated May 12, 2017May 12, 2017