Repositories list

• DRC-Portals

  Public
  TypeScript

  •0•0•26•3•Updated Oct 18, 2024Oct 18, 2024

• HarmonizomePythonScripts

  Public
  Jupyter Notebook

  •10•19•0•1•Updated Oct 18, 2024Oct 18, 2024

• Playbook-Workflow-Builder

  Public
  A repository for the Playbook Workflow Builder project.

  workflowdata-sciencebioinformatics+ 8gene-setsbiologysystems-biologygene-expressiongene-ontologyproteomicscwl+ 1

  TypeScript

  •

  Other

  •18•10•39•1•Updated Oct 18, 2024Oct 18, 2024

• Gene-Knowledge-Graph

  Public
  JavaScript

  •

  Other

  •11•7•5•1•Updated Oct 18, 2024Oct 18, 2024

• FAIRshake

  Public
  HTML

  •

  Other

  •6•10•28•6•Updated Oct 17, 2024Oct 17, 2024

• TranscriptionNetwork-Demo

  Public
  Demo of how to build a transcription factor KG using the KG UI

  Jupyter Notebook

  •11•0•0•0•Updated Oct 16, 2024Oct 16, 2024

• rummageo

  Public
  TypeScript

  •

  Other

  •3•2•1•0•Updated Oct 14, 2024Oct 14, 2024

• HarmonizomeKG

  Public
  KnowledgeGraphDemoNia

  Jupyter Notebook

  •11•0•0•0•Updated Oct 14, 2024Oct 14, 2024

• datadistillery-kg

  Public
  Jupyter Notebook

  •0•0•3•0•Updated Oct 14, 2024Oct 14, 2024

• GeneRanger

  Public
  JavaScript

  •

  Other

  •0•1•1•0•Updated Oct 11, 2024Oct 11, 2024

• PFOCRummage

  Public
  PLpgSQL

  •

  Other

  •3•1•0•0•Updated Oct 10, 2024Oct 10, 2024

• rummagene

  Public
  Python

  •

  Other

  •3•8•7•0•Updated Oct 7, 2024Oct 7, 2024

• dex-benchmark

  Public
  HTML

  •

  Other

  •1•1•5•0•Updated Oct 4, 2024Oct 4, 2024

• Enrichr-Viz-Appyter

  Public
  Appyter for enrichr canvases, scatter plots, and Manhattan plots

  Jupyter Notebook

  •2•0•3•0•Updated Oct 3, 2024Oct 3, 2024

• datacrossways_api

  Public
  Oauth flask server

  Python

  •

  Apache License 2.0

  •0•0•0•0•Updated Oct 3, 2024Oct 3, 2024

• ihdh_frontend

  Public
  Innovative Health Data Hub (IHDH) frontend

  JavaScript

  •0•0•6•0•Updated Oct 2, 2024Oct 2, 2024

• helm-charts

  Public
  A repository for helm charts

  Smarty

  •0•0•0•0•Updated Sep 26, 2024Sep 26, 2024

• Multiomics2Targets

  Public
  Expression to Kinases and Target Ranger

  Jupyter Notebook

  •0•0•2•0•Updated Sep 25, 2024Sep 25, 2024

• deriva-datapackage

  Public
  Use DERIVA DataPath queries on an offline Datapackage

  Python

  •1•0•0•0•Updated Sep 24, 2024Sep 24, 2024

• c2m2-assessment

  Public
  This application may be used for performing assessments on C2M2 datapackages

  Python

  •1•0•0•0•Updated Sep 24, 2024Sep 24, 2024

• dubois

  Public
  HTML

  •0•0•0•0•Updated Sep 24, 2024Sep 24, 2024

• x2k-pathway-analysis

  Public
  Computational pipeline implementing the optimized eXpression2Kinases workflow from CPTAC transcriptomics.

  Jupyter Notebook

  •

  Other

  •0•0•0•0•Updated Sep 24, 2024Sep 24, 2024

• datacrossways

  Public
  Launcher of data portal using the flask API and React fronted

  Python

  •

  Apache License 2.0

  •0•0•2•0•Updated Sep 10, 2024Sep 10, 2024

• drc-template

  Public
  TypeScript

  •0•0•0•0•Updated Aug 30, 2024Aug 30, 2024

• archs4py

  Public
  Python package to load and query ARCHS4 data

  Python

  •

  Apache License 2.0

  •3•14•2•0•Updated Aug 30, 2024Aug 30, 2024

• transcription-factor-KG

  Public
  JavaScript

  •

  Other

  •11•0•0•0•Updated Aug 23, 2024Aug 23, 2024

• speedrichr

  Public
  Java

  •2•0•0•0•Updated Aug 22, 2024Aug 22, 2024

• EnrichrPythonScripts

  Public
  Python Jupyter notebooks for Enrichr species databases

  Jupyter Notebook

  •0•3•0•0•Updated Aug 21, 2024Aug 21, 2024

• appyter-catalog

  Public
  A catalog of appyter notebooks

  Jupyter Notebook

  •

  Other

  •44•33•26•5•Updated Aug 20, 2024Aug 20, 2024

• blitzgsea

  Public
  Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for accurate p-value estimation.

  Jupyter Notebook

  •

  Apache License 2.0

  •8•40•1•0•Updated Aug 20, 2024Aug 20, 2024