Skip to content

@Genentech Genentech

Change the repository type filter

All

    Repositories list

    91 repositories

    • psborrow2

      Public
      psborrow2: Bayesian Dynamic Borrowing Simulation Study and Analysis
      simulation-studybayesian-dynamic-borrowingpsborrow2r
      R
      •
      Other
      •2•16•6•3•Updated Oct 23, 2024Oct 23, 2024

    • rd2markdown

      Public
      R
      •
      Other
      •0•7•5•0•Updated Oct 23, 2024Oct 23, 2024

    • gReLU

      Public
      gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.
      Python
      •
      MIT License
      •21•215•24•6•Updated Oct 22, 2024Oct 22, 2024

    • survivalCCW

      Public
      R
      •
      Other
      •0•0•3•1•Updated Oct 22, 2024Oct 22, 2024

    • phase1b

      Public
      R
      •
      Other
      •1•3•18•2•Updated Oct 19, 2024Oct 19, 2024

    • set-dino

      Public
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Oct 16, 2024Oct 16, 2024

    • jmpost

      Public
      R
      •4•17•55•1•Updated Oct 15, 2024Oct 15, 2024

    • pep2vec

      Public
      Python
      •
      Other
      •0•1•0•0•Updated Oct 14, 2024Oct 14, 2024

    • Perturb-OT

      Public
      Cross-modality matching and prediction with labeled Gromov-Wasserstein Optimal Transport.
      Jupyter Notebook
      •
      Other
      •1•10•0•0•Updated Oct 10, 2024Oct 10, 2024

    • ARGMINN

      Public
      Jupyter Notebook
      •
      Other
      •0•1•0•0•Updated Oct 10, 2024Oct 10, 2024

    • decima-applications

      Public
      Jupyter Notebook
      •
      Other
      •1•6•0•0•Updated Oct 9, 2024Oct 9, 2024

    • decima

      Public
      Decima is a Python library to train sequence models on single-cell RNA-seq data.
      Jupyter Notebook
      •
      Other
      •1•13•1•0•Updated Oct 9, 2024Oct 9, 2024

    • checked

      Public
      batch R CMD check management
      rchecksrevdeps
      R
      •
      Other
      •1•7•11•0•Updated Oct 8, 2024Oct 8, 2024

    • Islander

      Public
      Jupyter Notebook
      •
      MIT License
      •0•8•0•0•Updated Oct 5, 2024Oct 5, 2024

    • regLM

      Public
      Toolkit for training hyenaDNA-based autoregressive language models on DNA sequences.
      Jupyter Notebook
      •
      MIT License
      •1•28•0•0•Updated Oct 4, 2024Oct 4, 2024

    • beignet

      Public
      A standard library for biological research.
      Python
      •
      MIT License
      •5•15•13•15•Updated Oct 4, 2024Oct 4, 2024

    • Firmament

      Public
      Provides method to perform gene signature search
      Python
      •
      MIT License
      •0•0•0•0•Updated Oct 3, 2024Oct 3, 2024

    • pysummaries

      Public
      Generate beautiful summary tables from pandas dataframes
      pythonpandas-dataframepandastablesclinical-researchsummary-statisticstableonetable1real-world-data-analysis
      Python
      •
      Other
      •1•18•0•0•Updated Oct 3, 2024Oct 3, 2024

    • Haag_ng_2024

      Public
      Python
      •
      Other
      •0•0•0•0•Updated Sep 25, 2024Sep 25, 2024

    • SpatialQPFs

      Public
      HTML
      •0•1•0•0•Updated Sep 23, 2024Sep 23, 2024

    • 2024_cruz_etal

      Public
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Sep 19, 2024Sep 19, 2024

    • gReLU-applications

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Sep 18, 2024Sep 18, 2024

    • spex

      Public
      PLpgSQL
      •
      Other
      •0•0•3•0•Updated Sep 18, 2024Sep 18, 2024

    • scimilarity

      Public
      A unifying representation of single cell expression profiles that quantifies similarity between expression states and generalizes to represent new studies without additional training.
      Python
      •
      Other
      •1•91•10•0•Updated Sep 14, 2024Sep 14, 2024

    • modsculpt_example

      Public
      JavaScript
      •
      MIT License
      •0•0•0•0•Updated Sep 13, 2024Sep 13, 2024

    • GameRank

      Public
      R
      •1•10•0•0•Updated Sep 9, 2024Sep 9, 2024

    • modsculpt

      Public
      Direct and Indirect Additive Modeling with Model Sculpting
      R
      •
      Apache License 2.0
      •0•0•0•0•Updated Sep 5, 2024Sep 5, 2024

    • branched-diffusion

      Public
      Jupyter Notebook
      •
      Other
      •3•8•0•0•Updated Aug 27, 2024Aug 27, 2024

    • Isosceles

      Public
      The Isoforms from Single-Cell; Long-read Expression Suite
      R
      •
      GNU General Public License v3.0
      •0•16•6•0•Updated Aug 27, 2024Aug 27, 2024

    • gneSeqCOO

      Public
      R
      •
      Other
      •0•0•0•0•Updated Aug 15, 2024Aug 15, 2024