Using RO in Chado

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Chris Mungall edited this page Jun 16, 2016 · 1 revision

We have a RO subset that is designed specifically for use in Chado databases.

The permanent URL for this is:

http://purl.obolibrary.org/obo/ro/subsets/ro-chado.obo

This always resolves to the latest version. Permanent URLs are also available for each release, these are of the form:

http://purl.obolibrary.org/obo/ro/releases/YYYY-MM-DD/subsets/ro-chado.obo

This different from the main releases ro.obo and ro.owl in the following respects:

An additional stanza is added for the is_a relation
The ontology is guaranteed to have a default-namespace: ro header
There are no classes ([Term]s) in the file

For more background, see #68