Merge pull request #10495 from obophenotype/release

Update release files
obophenotype · Apr 26, 2024 · a40cfe6 · a40cfe6
2 parents cce4cc9 + 3f83dcb
commit a40cfe6
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Showing 24 changed files with 2,896 additions and 1,190 deletions.
diff --git a/hp-base.owl b/hp-base.owl
@@ -13,7 +13,7 @@
      xmlns:dcterms="http://purl.org/dc/terms/"
      xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#">
     <owl:Ontology rdf:about="http://purl.obolibrary.org/obo/hp/hp-base.owl">
-        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/hp/releases/2024-04-19/hp-base.owl"/>
+        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/hp/releases/2024-04-26/hp-base.owl"/>
         <obo:IAO_0000700 rdf:resource="http://purl.obolibrary.org/obo/HP_0000001"/>
         <dc:creator>Human Phenotype Ontology Consortium</dc:creator>
         <dc:creator>Monarch Initiative</dc:creator>
@@ -28,7 +28,7 @@
         <oboInOwl:default-namespace>human_phenotype</oboInOwl:default-namespace>
         <oboInOwl:logical-definition-view-relation>has_part</oboInOwl:logical-definition-view-relation>
         <rdfs:comment>Please see license of HPO at http://www.human-phenotype-ontology.org</rdfs:comment>
-        <owl:versionInfo>2024-04-19</owl:versionInfo>
+        <owl:versionInfo>2024-04-26</owl:versionInfo>
     </owl:Ontology>
 
 
@@ -548699,11 +548699,14 @@
                                 <owl:someValuesFrom>
                                     <owl:Class>
                                         <owl:intersectionOf rdf:parseType="Collection">
-                                            <rdf:Description rdf:about="http://purl.obolibrary.org/obo/CHEBI_25212"/>
                                             <owl:Restriction>
                                                 <owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
                                                 <owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/UBERON_0000178"/>
                                             </owl:Restriction>
+                                            <owl:Restriction>
+                                                <owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
+                                                <owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/CHEBI_25212"/>
+                                            </owl:Restriction>
                                         </owl:intersectionOf>
                                     </owl:Class>
                                 </owl:someValuesFrom>
@@ -548730,11 +548733,14 @@
                                 <owl:someValuesFrom>
                                     <owl:Class>
                                         <owl:intersectionOf rdf:parseType="Collection">
-                                            <rdf:Description rdf:about="http://purl.obolibrary.org/obo/CHEBI_25212"/>
                                             <owl:Restriction>
                                                 <owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
                                                 <owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/UBERON_0000178"/>
                                             </owl:Restriction>
+                                            <owl:Restriction>
+                                                <owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
+                                                <owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/CHEBI_25212"/>
+                                            </owl:Restriction>
                                         </owl:intersectionOf>
                                     </owl:Class>
                                 </owl:someValuesFrom>
@@ -598014,11 +598020,14 @@
                                 <owl:someValuesFrom>
                                     <owl:Class>
                                         <owl:intersectionOf rdf:parseType="Collection">
-                                            <rdf:Description rdf:about="http://purl.obolibrary.org/obo/CHEBI_23354"/>
                                             <owl:Restriction>
                                                 <owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
                                                 <owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/UBERON_0000178"/>
                                             </owl:Restriction>
+                                            <owl:Restriction>
+                                                <owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
+                                                <owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/CHEBI_23354"/>
+                                            </owl:Restriction>
                                         </owl:intersectionOf>
                                     </owl:Class>
                                 </owl:someValuesFrom>
@@ -598045,11 +598054,14 @@
                                 <owl:someValuesFrom>
                                     <owl:Class>
                                         <owl:intersectionOf rdf:parseType="Collection">
-                                            <rdf:Description rdf:about="http://purl.obolibrary.org/obo/CHEBI_23354"/>
                                             <owl:Restriction>
                                                 <owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
                                                 <owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/UBERON_0000178"/>
                                             </owl:Restriction>
+                                            <owl:Restriction>
+                                                <owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
+                                                <owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/CHEBI_23354"/>
+                                            </owl:Restriction>
                                         </owl:intersectionOf>
                                     </owl:Class>
                                 </owl:someValuesFrom>
@@ -611197,17 +611209,17 @@
     <!-- http://purl.obolibrary.org/obo/HP_0040165 -->
 
     <owl:Class rdf:about="http://purl.obolibrary.org/obo/HP_0040165">
-        <owl:equivalentClass rdf:nodeID="genid64675"/>
+        <owl:equivalentClass rdf:nodeID="genid64677"/>
         <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/HP_0030313"/>
-        <rdfs:subClassOf rdf:nodeID="genid64675"/>
+        <rdfs:subClassOf rdf:nodeID="genid64677"/>
         <obo:IAO_0000115>Inflammation of the periosteum</obo:IAO_0000115>
         <oboInOwl:hasDbXref>MSH:D010522</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>SNOMEDCT_US:41910004</oboInOwl:hasDbXref>
         <oboInOwl:hasDbXref>UMLS:C0031111</oboInOwl:hasDbXref>
         <oboInOwl:hasExactSynonym>Periostalgia</oboInOwl:hasExactSynonym>
         <rdfs:label>Periostitis</rdfs:label>
     </owl:Class>
-    <owl:Restriction rdf:nodeID="genid64675">
+    <owl:Restriction rdf:nodeID="genid64677">
         <owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
         <owl:someValuesFrom>
             <owl:Class>
@@ -611238,7 +611250,7 @@
     <owl:Axiom>
         <owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/HP_0040165"/>
         <owl:annotatedProperty rdf:resource="http://www.w3.org/2002/07/owl#equivalentClass"/>
-        <owl:annotatedTarget rdf:nodeID="genid64675"/>
+        <owl:annotatedTarget rdf:nodeID="genid64677"/>
         <dcterms:creator rdf:resource="https://orcid.org/0000-0002-5316-1399"/>
     </owl:Axiom>
 
@@ -657765,10 +657777,10 @@
     <!-- http://purl.obolibrary.org/obo/HP_0100537 -->
 
     <owl:Class rdf:about="http://purl.obolibrary.org/obo/HP_0100537">
-        <owl:equivalentClass rdf:nodeID="genid70481"/>
+        <owl:equivalentClass rdf:nodeID="genid70483"/>
         <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/HP_0012649"/>
         <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/HP_0100536"/>
-        <rdfs:subClassOf rdf:nodeID="genid70481"/>
+        <rdfs:subClassOf rdf:nodeID="genid70483"/>
         <obo:IAO_0000115>Inflammation of fascia, the tissue under the skin and over the muscle.</obo:IAO_0000115>
         <dcterms:creator rdf:resource="https://orcid.org/0009-0006-4530-3154"/>
         <oboInOwl:creation_date>2010-12-20T05:59:18Z</oboInOwl:creation_date>
@@ -657779,7 +657791,7 @@
         <oboInOwl:id>HP:0100537</oboInOwl:id>
         <rdfs:label>Fasciitis</rdfs:label>
     </owl:Class>
-    <owl:Restriction rdf:nodeID="genid70481">
+    <owl:Restriction rdf:nodeID="genid70483">
         <owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
         <owl:someValuesFrom>
             <owl:Class>
@@ -657810,7 +657822,7 @@
     <owl:Axiom>
         <owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/HP_0100537"/>
         <owl:annotatedProperty rdf:resource="http://www.w3.org/2002/07/owl#equivalentClass"/>
-        <owl:annotatedTarget rdf:nodeID="genid70481"/>
+        <owl:annotatedTarget rdf:nodeID="genid70483"/>
         <dcterms:creator rdf:resource="https://orcid.org/0000-0002-5316-1399"/>
     </owl:Axiom>
     <owl:Axiom>
@@ -695738,17 +695750,17 @@
     <!-- http://purl.obolibrary.org/obo/HP_0430013 -->
 
     <owl:Class rdf:about="http://purl.obolibrary.org/obo/HP_0430013">
-        <owl:equivalentClass rdf:nodeID="genid74864"/>
+        <owl:equivalentClass rdf:nodeID="genid74866"/>
         <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/HP_0430003"/>
-        <rdfs:subClassOf rdf:nodeID="genid74864"/>
+        <rdfs:subClassOf rdf:nodeID="genid74866"/>
         <obo:IAO_0000115>Lack of formation of the palatine bone.</obo:IAO_0000115>
         <oboInOwl:hasDbXref>UMLS:C4021867</oboInOwl:hasDbXref>
         <oboInOwl:hasNarrowSynonym>Absence of palatine bone calcification</oboInOwl:hasNarrowSynonym>
         <oboInOwl:hasNarrowSynonym>Absence of palatine bone mineralization</oboInOwl:hasNarrowSynonym>
         <oboInOwl:hasRelatedSynonym>Absence of palatine bone formation</oboInOwl:hasRelatedSynonym>
         <rdfs:label>Absent palatine bone ossification</rdfs:label>
     </owl:Class>
-    <owl:Restriction rdf:nodeID="genid74864">
+    <owl:Restriction rdf:nodeID="genid74866">
         <owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
         <owl:someValuesFrom>
             <owl:Class>
@@ -695779,7 +695791,7 @@
     <owl:Axiom>
         <owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/HP_0430013"/>
         <owl:annotatedProperty rdf:resource="http://www.w3.org/2002/07/owl#equivalentClass"/>
-        <owl:annotatedTarget rdf:nodeID="genid74864"/>
+        <owl:annotatedTarget rdf:nodeID="genid74866"/>
         <oboInOwl:creation_date rdf:resource="https://orcid.org/0000-0002-5316-1399"/>
     </owl:Axiom>
     <owl:Axiom>

diff --git a/hp.obo b/hp.obo
@@ -1,5 +1,5 @@
 format-version: 1.2
-data-version: hp/releases/2024-04-19
+data-version: hp/releases/2024-04-26
 subsetdef: hposlim_core "Core clinical terminology"
 subsetdef: secondary_consequence "Consequence of a disorder in another organ system."
 synonymtypedef: abbreviation "abbreviation"
@@ -21,7 +21,7 @@ property_value: http://purl.org/dc/elements/1.1/subject "Phenotypic abnormalitie
 property_value: http://purl.org/dc/elements/1.1/title "Human Phenotype Ontology" xsd:string
 property_value: http://purl.org/dc/terms/license https://hpo.jax.org/app/license
 property_value: IAO:0000700 HP:0000001
-property_value: owl:versionInfo "2024-04-19" xsd:string
+property_value: owl:versionInfo "2024-04-26" xsd:string
 logical-definition-view-relation: has_part
 
 [Term]

diff --git a/patterns/definitions.owl b/patterns/definitions.owl
@@ -7,8 +7,8 @@ Prefix(rdfs:=<http://www.w3.org/2000/01/rdf-schema#>)
 
 
 Ontology(<http://purl.obolibrary.org/obo/hp/patterns/definitions.owl>
-<http://purl.obolibrary.org/obo/hp/releases/2024-04-19/patterns/definitions.owl>
-Annotation(owl:versionInfo "2024-04-19")
+<http://purl.obolibrary.org/obo/hp/releases/2024-04-26/patterns/definitions.owl>
+Annotation(owl:versionInfo "2024-04-26")