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Update some module versions #6798

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Update some module versions #6798

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+850 −611

Commits on Oct 17, 2024

  1. Update modules for versions with ARM builds

    @pinin4fjords
    pinin4fjords committed Oct 17, 2024
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  2. update picard containers

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    pinin4fjords committed Oct 17, 2024
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  3. Fix containers for getchromsizes

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    pinin4fjords committed Oct 17, 2024
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  4. Pick python version with ARM conda builds and biocontainer

    @pinin4fjords
    pinin4fjords committed Oct 17, 2024
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  5. Fix other containers

    @pinin4fjords
    pinin4fjords committed Oct 17, 2024
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Commits on Oct 18, 2024

  1. Remove quay.io

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    pinin4fjords committed Oct 18, 2024
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  2. Bump bedgraphtobigwig

    @pinin4fjords
    pinin4fjords committed Oct 18, 2024
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  3. First batch of nf-test updates

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    pinin4fjords committed Oct 18, 2024
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  4. Second batch of nf-test updates

    @pinin4fjords
    pinin4fjords committed Oct 18, 2024
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  5. Update thests for liftovervcf

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    pinin4fjords committed Oct 18, 2024
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  6. One more nf-test update

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    pinin4fjords committed Oct 18, 2024
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  7. Last update: trimgalore

    @pinin4fjords
    pinin4fjords committed Oct 18, 2024
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  8. match conda cutadapt to trimgalore container

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    pinin4fjords committed Oct 18, 2024
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  9. change r-base for picard

    @pinin4fjords
    pinin4fjords committed Oct 18, 2024
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  10. [skip ci] nf-test migration for picard/collectrnaseqmetrics

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    pinin4fjords committed Oct 18, 2024
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  11. nf-test migration for picard/filtersamreads

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    pinin4fjords committed Oct 18, 2024
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  12. Factor out setup

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    pinin4fjords committed Oct 18, 2024
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  13. Move bam checking to nft-bam

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    pinin4fjords committed Oct 18, 2024
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  14. Add missing tags

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    pinin4fjords committed Oct 18, 2024
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  15. Merge branch 'master' into update_some_modules

    @pinin4fjords
    pinin4fjords authored Oct 18, 2024
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