Update utils-nfcore-pipeline: add multiqc report to completion email #4892
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mirpedrol
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maxulysse,
mashehu,
adamrtalbot and
drpatelh
mashehu
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Feb 12, 2024
| @@ -287,6 +287,24 @@ def completionEmail(summary_params, email, email_on_fail, plaintext_email, outdi | |||
| email_fields['projectDir'] = workflow.projectDir | |||
| email_fields['summary'] = summary << misc_fields | |||
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| // On success try attach the multiqc report | |||
| def mqc_report = null | |||
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Suggested change
| def mqc_report = null | |
| def mqc_report = [] |
So it's the same type as the multiqc_report parameter
|
Moved attaching the mutiqc report to a separate function with fa89e99. |
mashehu
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Feb 12, 2024
jch-13
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Mar 19, 2024
…f-core#4892) * add multiqc report to completion email * move attaching multiqc report to a separate function
jennylsmith
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Mar 20, 2024
…f-core#4892) * add multiqc report to completion email * move attaching multiqc report to a separate function
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Change according to the nf-core pipeline template nf-core/tools#2736