chore: Add a TODO for poddar's test

nf-core · Jul 8, 2024 · fc03ab9 · fc03ab9
1 parent f1d713f
commit fc03ab9
Showing 1 changed file with 10 additions and 0 deletions.
diff --git a/modules/nf-core/narfmap/align/tests/segfault.nf.test b/modules/nf-core/narfmap/align/tests/segfault.nf.test
@@ -54,4 +54,14 @@ nextflow_process {
 
     }
 
+    // TODO
+    // https://nfcore.slack.com/archives/CGFUX04HZ/p1718268624579699?thread_ts=1718108323.285709&cid=CGFUX04HZ
+    // https://ftp.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG002_NA24385_son/NIST_HiSeq_HG002_Homogeneity-10953946/HG002_HiSeq300x_fastq/140528_D00360_0018_AH8VC6ADXX/Project_RM8391_RM8392/Sample_2A1/2A1_CGATGT_L001_R1_001.fastq.gz
+    // https://ftp.ncbi.nlm.nih.gov/ReferenceSamples/giab/data/AshkenazimTrio/HG002_NA24385_son/NIST_HiSeq_HG002_Homogeneity-10953946/HG002_HiSeq300x_fastq/140528_D00360_0018_AH8VC6ADXX/Project_RM8391_RM8392/Sample_2A1/2A1_CGATGT_L001_R2_001.fastq.gz
+    // {{dragen}} \
+    //     -r /home/tigem/h.poddar/short_reads_pipelines/ref_genome/GRCh37/hash/ \
+    //     -1 /home/tigem/h.poddar/DRAGMAP/2A1_CGATGT_L001_R1_001.fastq.gz \
+    //     -2 /home/tigem/h.poddar/DRAGMAP/2A1_CGATGT_L001_R2_001.fastq.gz \
+    //     | samtools view -h -O BAM - > aligned.bam
+
 }