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Stop nf-test complaining about missing dependency (#6652)
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* Finish filepaths

* Fix tags
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SPPearce authored Sep 17, 2024
1 parent f768b28 commit 94ae259
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Showing 2 changed files with 10 additions and 10 deletions.
4 changes: 2 additions & 2 deletions modules/nf-core/ltrfinder/tests/main.nf.test
Original file line number Diff line number Diff line change
Expand Up @@ -7,13 +7,13 @@ nextflow_process {
tag "modules"
tag "modules_nfcore"
tag "ltrfinder"
tag "gunzip/main"
tag "gunzip"

test("actinidia_chinensis-genome_21_fasta_gz-success") {

setup {
run('GUNZIP') {
script "../../gunzip/main"
script "../../gunzip/main.nf"

process {
"""
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16 changes: 8 additions & 8 deletions modules/nf-core/ltrretriever/ltrretriever/tests/main.nf.test
Original file line number Diff line number Diff line change
Expand Up @@ -9,7 +9,7 @@ nextflow_process {
tag "modules_nfcore"
tag "ltrretriever"
tag "ltrretriever/ltrretriever"
tag "gunzip/main"
tag "gunzip"
tag "ltrharvest"
tag "ltrfinder"
tag "cat/cat"
Expand All @@ -19,7 +19,7 @@ nextflow_process {
setup {

run("LTRHARVEST") {
script "../../../ltrharvest"
script "../../../ltrharvest/main.nf"

process {
"""
Expand All @@ -32,7 +32,7 @@ nextflow_process {
}

run("LTRFINDER") {
script "../../../ltrfinder"
script "../../../ltrfinder/main.nf"

process {
"""
Expand All @@ -45,7 +45,7 @@ nextflow_process {
}

run("CAT_CAT") {
script "../../../cat/cat"
script "../../../cat/cat/main.nf"

process {
"""
Expand Down Expand Up @@ -85,7 +85,7 @@ nextflow_process {
setup {

run('GUNZIP') {
script "../../../gunzip/main"
script "../../../gunzip/main.nf"

process {
"""
Expand All @@ -98,7 +98,7 @@ nextflow_process {
}

run("LTRHARVEST") {
script "../../../ltrharvest"
script "../../../ltrharvest/main.nf"

process {
"""
Expand All @@ -108,7 +108,7 @@ nextflow_process {
}

run("LTRFINDER") {
script "../../../ltrfinder"
script "../../../ltrfinder/main.nf"

process {
"""
Expand All @@ -118,7 +118,7 @@ nextflow_process {
}

run("CAT_CAT") {
script "../../../cat/cat"
script "../../../cat/cat/main.nf"

process {
"""
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