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Revert sratools fasterqdump version #857

Revert sratools fasterqdump version

Revert sratools fasterqdump version #857

Triggered via pull request January 31, 2024 12:18
Status Success
Total duration 4m 10s
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ci.yml

on: pull_request
Check for changes
37s
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Matrix: test
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10 errors and 21 warnings
FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
CUSTOM_SRATOOLSNCBISETTINGS docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
SRATOOLS_PREFETCH docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
UNTAR docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
CUSTOM_SRATOOLSNCBISETTINGS docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
SRATOOLS_FASTERQDUMP docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
SRATOOLS_FASTERQDUMP docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
UNTAR docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
SRATOOLS_PREFETCH docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
Check for changes
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/cache@v3, actions/checkout@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS docker NF-latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
CUSTOM_SRATOOLSNCBISETTINGS docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
CUSTOM_SRATOOLSNCBISETTINGS docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
FASTQ_DOWNLOAD_PREFETCH_FASTERQDUMP_SRATOOLS docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
SRATOOLS_PREFETCH docker NF-latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
SRATOOLS_PREFETCH docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
UNTAR docker NF-latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
UNTAR docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
CUSTOM_SRATOOLSNCBISETTINGS docker NF-latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
CUSTOM_SRATOOLSNCBISETTINGS docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
SRATOOLS_FASTERQDUMP docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
SRATOOLS_FASTERQDUMP docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
SRATOOLS_FASTERQDUMP docker NF-latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
SRATOOLS_FASTERQDUMP docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
UNTAR docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
UNTAR docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
SRATOOLS_PREFETCH docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
SRATOOLS_PREFETCH docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23