Skip to content

318 update for tes compliance #1041

318 update for tes compliance

318 update for tes compliance #1041

Triggered via pull request October 15, 2024 09:33
Status Failure
Total duration 8m 6s
Artifacts

ci.yml

on: pull_request
Check for changes
18s
Check for changes
Matrix: test
confirm-pass
0s
confirm-pass
Fit to window
Zoom out
Zoom in

Annotations

37 errors and 27 warnings
workflows/sra/tests/sra_skip_fastq_download.nf.test | latest-everything | docker
Process completed with exit code 1.
workflows/sra/tests/sra_skip_fastq_download.nf.test | latest-everything | docker
Process completed with exit code 1.
workflows/sra/tests/sra_skip_fastq_download.nf.test | 24.04.2 | docker
Process completed with exit code 1.
workflows/sra/tests/sra_skip_fastq_download.nf.test | 24.04.2 | docker
Process completed with exit code 1.
workflows/sra/tests/sra_nf_core_pipeline_viralrecon.nf.test | 24.04.2 | docker
Process completed with exit code 1.
workflows/sra/tests/sra_nf_core_pipeline_viralrecon.nf.test | 24.04.2 | docker
Process completed with exit code 1.
workflows/sra/tests/sra_download_method_aspera.nf.test | 24.04.2 | docker
Process completed with exit code 1.
workflows/sra/tests/sra_download_method_aspera.nf.test | 24.04.2 | docker
Process completed with exit code 1.
workflows/sra/tests/main.nf.test | latest-everything | docker
Process completed with exit code 1.
workflows/sra/tests/main.nf.test | latest-everything | docker
Process completed with exit code 1.
workflows/sra/tests/main.nf.test | 24.04.2 | docker
Process completed with exit code 1.
workflows/sra/tests/main.nf.test | 24.04.2 | docker
Process completed with exit code 1.
workflows/sra/tests/sra_custom_ena_metadata_fields.nf.test | 24.04.2 | docker
Process completed with exit code 1.
workflows/sra/tests/sra_custom_ena_metadata_fields.nf.test | 24.04.2 | docker
Process completed with exit code 1.
workflows/sra/tests/sra_nf_core_pipeline_taxprofiler.nf.test | 24.04.2 | docker
Process completed with exit code 1.
workflows/sra/tests/sra_nf_core_pipeline_taxprofiler.nf.test | 24.04.2 | docker
Process completed with exit code 1.
workflows/sra/tests/sra_nf_core_pipeline_atacseq.nf.test | 24.04.2 | docker
Process completed with exit code 1.
workflows/sra/tests/sra_nf_core_pipeline_atacseq.nf.test | 24.04.2 | docker
Process completed with exit code 1.
workflows/sra/tests/sra_download_method_sratools.nf.test | 24.04.2 | docker
Process completed with exit code 1.
workflows/sra/tests/sra_download_method_sratools.nf.test | 24.04.2 | docker
Process completed with exit code 1.
workflows/sra/tests/sra_nf_core_pipeline_rnaseq.nf.test | 24.04.2 | docker
Process completed with exit code 1.
workflows/sra/tests/sra_nf_core_pipeline_rnaseq.nf.test | 24.04.2 | docker
Process completed with exit code 1.
confirm-pass
Process completed with exit code 1.
Check for changes
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/sra_nf_core_pipeline_atacseq.nf.test | latest-everything | docker
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
modules/local/multiqc_mappings_config/tests/main.nf.test | 24.04.2 | docker
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/sra_nf_core_pipeline_taxprofiler.nf.test | latest-everything | docker
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/sra_skip_fastq_download.nf.test | latest-everything | docker
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/sra_skip_fastq_download.nf.test | 24.04.2 | docker
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/sra_nf_core_pipeline_viralrecon.nf.test | 24.04.2 | docker
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
subworkflows/nf-core/fastq_download_prefetch_fasterqdump_sratools/tests/main.nf.test | 24.04.2 | docker
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
modules/nf-core/sratools/prefetch/tests/main.nf.test | 24.04.2 | docker
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
modules/nf-core/sratools/prefetch/tests/main.nf.test | latest-everything | docker
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/sra_download_method_aspera.nf.test | 24.04.2 | docker
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/main.nf.test | latest-everything | docker
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/sra_download_method_sratools.nf.test | latest-everything | docker
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
subworkflows/nf-core/fastq_download_prefetch_fasterqdump_sratools/tests/main.nf.test | latest-everything | docker
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/sra_nf_core_pipeline_viralrecon.nf.test | latest-everything | docker
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/sra_download_method_aspera.nf.test | latest-everything | docker
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/main.nf.test | 24.04.2 | docker
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
modules/local/multiqc_mappings_config/tests/main.nf.test | latest-everything | docker
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/sra_custom_ena_metadata_fields.nf.test | 24.04.2 | docker
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/sra_nf_core_pipeline_taxprofiler.nf.test | 24.04.2 | docker
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/sra_nf_core_pipeline_atacseq.nf.test | 24.04.2 | docker
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/sra_custom_ena_metadata_fields.nf.test | latest-everything | docker
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/sra_nf_core_pipeline_rnaseq.nf.test | latest-everything | docker
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/sra_download_method_sratools.nf.test | 24.04.2 | docker
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
tests/main.nf.test | 24.04.2 | docker
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
workflows/sra/tests/sra_nf_core_pipeline_rnaseq.nf.test | 24.04.2 | docker
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
tests/main.nf.test | latest-everything | docker
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/