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Important! Template update for nf-core/tools v3.0.2 #1031

Important! Template update for nf-core/tools v3.0.2

Important! Template update for nf-core/tools v3.0.2 #1031

Triggered via pull request October 14, 2024 10:19
Status Cancelled
Total duration 4m 12s
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46 errors and 31 warnings
Test on (24.04.2 | modules/local/sra_runinfo_to_ftp/tests/main.nf.test | docker)
Process completed with exit code 1.
Test on (24.04.2 | modules/nf-core/untar/tests/main.nf.test | docker)
Process completed with exit code 1.
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Process completed with exit code 1.
Test on (latest-everything | modules/nf-core/untar/tests/main.nf.test | docker)
Process completed with exit code 1.
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Test on (latest-everything | workflows/sra/tests/sra_skip_fastq_download.nf.test | docker)
Canceling since a higher priority waiting request for 'nf-core CI-323' exists
Test on (24.04.2 | subworkflows/nf-core/utils_nfcore_pipeline/tests/main.function.nf.test | docker)
Canceling since a higher priority waiting request for 'nf-core CI-323' exists
Test on (24.04.2 | subworkflows/nf-core/fastq_download_prefetch_fasterqdump_sratools/tests/main.nf.test | docker)
Canceling since a higher priority waiting request for 'nf-core CI-323' exists
Test on (latest-everything | modules/local/sra_fastq_ftp/tests/main.nf.test | docker)
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Test on (latest-everything | modules/local/sra_runinfo_to_ftp/tests/main.nf.test | docker)
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Test on (24.04.2 | workflows/sra/tests/sra_nf_core_pipeline_rnaseq.nf.test | docker)
Canceling since a higher priority waiting request for 'nf-core CI-323' exists
Test on (latest-everything | workflows/sra/tests/sra_nf_core_pipeline_atacseq.nf.test | docker)
Canceling since a higher priority waiting request for 'nf-core CI-323' exists
Test on (24.04.2 | workflows/sra/tests/sra_custom_ena_metadata_fields.nf.test | docker)
Canceling since a higher priority waiting request for 'nf-core CI-323' exists
Test on (24.04.2 | modules/nf-core/custom/sratoolsncbisettings/tests/main.nf.test | docker)
Canceling since a higher priority waiting request for 'nf-core CI-323' exists
Test on (latest-everything | subworkflows/nf-core/utils_nextflow_pipeline/tests/main.workflow.nf.test | docker)
Canceling since a higher priority waiting request for 'nf-core CI-323' exists
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Test on (latest-everything | modules/local/sra_to_samplesheet/tests/main.nf.test | docker)
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Test on (latest-everything | tests/main.nf.test | docker)
The operation was canceled.
Test on (24.04.2 | workflows/sra/tests/sra_download_method_sratools.nf.test | docker)
Canceling since a higher priority waiting request for 'nf-core CI-323' exists
Test on (latest-everything | workflows/sra/tests/sra_download_method_aspera.nf.test | docker)
Canceling since a higher priority waiting request for 'nf-core CI-323' exists
Test on (latest-everything | subworkflows/local/utils_nfcore_fetchngs_pipeline/tests/main.function.nf.test | docker)
Canceling since a higher priority waiting request for 'nf-core CI-323' exists
Test on (24.04.2 | subworkflows/nf-core/utils_nextflow_pipeline/tests/main.function.nf.test | docker)
Canceling since a higher priority waiting request for 'nf-core CI-323' exists
Test on (latest-everything | modules/nf-core/sratools/fasterqdump/tests/main.nf.test | docker)
Canceling since a higher priority waiting request for 'nf-core CI-323' exists
Test on (24.04.2 | modules/local/sra_fastq_ftp/tests/main.nf.test | docker)
Canceling since a higher priority waiting request for 'nf-core CI-323' exists
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The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Test on (latest-everything | subworkflows/local/utils_nfcore_fetchngs_pipeline/tests/main.workflow_pipeline_completion.nf.test | docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Test on (24.04.2 | modules/local/sra_to_samplesheet/tests/main.nf.test | docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Test on (latest-everything | subworkflows/nf-core/utils_nfcore_pipeline/tests/main.workflow.nf.test | docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Test on (24.04.2 | subworkflows/local/utils_nfcore_fetchngs_pipeline/tests/main.workflow_pipeline_completion.nf.test | docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Test on (latest-everything | modules/nf-core/sratools/prefetch/tests/main.nf.test | docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Test on (24.04.2 | workflows/sra/tests/sra_skip_fastq_download.nf.test | docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Test on (24.04.2 | modules/nf-core/sratools/fasterqdump/tests/main.nf.test | docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Test on (24.04.2 | subworkflows/nf-core/utils_nfcore_pipeline/tests/main.workflow.nf.test | docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Test on (24.04.2 | modules/local/multiqc_mappings_config/tests/main.nf.test | docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Test on (latest-everything | modules/local/sra_ids_to_runinfo/tests/main.nf.test | docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Test on (24.04.2 | modules/local/sra_ids_to_runinfo/tests/main.nf.test | docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Test on (24.04.2 | subworkflows/nf-core/utils_nextflow_pipeline/tests/main.workflow.nf.test | docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Test on (24.04.2 | modules/local/sra_runinfo_to_ftp/tests/main.nf.test | docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Test on (24.04.2 | workflows/sra/tests/sra_nf_core_pipeline_viralrecon.nf.test | docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Test on (latest-everything | workflows/sra/tests/sra_nf_core_pipeline_rnaseq.nf.test | docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Test on (latest-everything | workflows/sra/tests/sra_nf_core_pipeline_taxprofiler.nf.test | docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Test on (latest-everything | workflows/sra/tests/sra_custom_ena_metadata_fields.nf.test | docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Test on (24.04.2 | subworkflows/local/utils_nfcore_fetchngs_pipeline/tests/main.workflow_pipeline_initialisation.nf.test | docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Test on (latest-everything | subworkflows/local/utils_nfcore_fetchngs_pipeline/tests/main.workflow_pipeline_initialisation.nf.test | docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Test on (latest-everything | workflows/sra/tests/main.nf.test | docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Test on (24.04.2 | modules/local/aspera_cli/tests/main.nf.test | docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Test on (24.04.2 | workflows/sra/tests/main.nf.test | docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Test on (24.04.2 | modules/nf-core/untar/tests/main.nf.test | docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Test on (24.04.2 | modules/nf-core/sratools/prefetch/tests/main.nf.test | docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Test on (latest-everything | workflows/sra/tests/sra_nf_core_pipeline_viralrecon.nf.test | docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Test on (latest-everything | modules/nf-core/untar/tests/main.nf.test | docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Test on (latest-everything | modules/local/aspera_cli/tests/main.nf.test | docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Test on (24.04.2 | workflows/sra/tests/sra_nf_core_pipeline_taxprofiler.nf.test | docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Test on (24.04.2 | workflows/sra/tests/sra_nf_core_pipeline_atacseq.nf.test | docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Test on (latest-everything | subworkflows/nf-core/utils_nfschema_plugin/tests/main.nf.test | docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/