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use subworkflows/local/bam_peaks_call_qc_annotate_macs2_homer from nf-core/atacseq #627

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use subworkflows/local/bam_peaks_call_qc_annotate_macs2_homer from nf-core/atacseq

use subworkflows/local/bam_peaks_call_qc_annotate_macs2_homer from nf-core/atacseq #627

Triggered via pull request July 5, 2024 09:41
@bjlangbjlang
opened #400
bjlang:dev
Status Failure
Total duration 3m 20s
Artifacts –

ci.yml

on: pull_request
Matrix: Test available aligners
Matrix: Test workflow parameters
Matrix: Run pipeline with test data
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10 errors and 4 warnings
Test workflow parameters (--skip_consensus_peaks)
Process completed with exit code 1.
Test available aligners (bowtie2)
Process completed with exit code 1.
Test available aligners (chromap)
The job was canceled because "bowtie2" failed.
Test available aligners (chromap)
Process completed with exit code 1.
Test available aligners (star)
The job was canceled because "bowtie2" failed.
Test available aligners (star)
Process completed with exit code 1.
Test workflow parameters (--skip_trimming)
The job was canceled because "_--skip_consensus_peaks" failed.
Test workflow parameters (--skip_trimming)
The operation was canceled.
Run pipeline with test data (latest-everything)
Process completed with exit code 1.
Run pipeline with test data (23.04.0)
The job was canceled because "latest-everything" failed.
Test workflow parameters (--skip_consensus_peaks)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Test workflow parameters (--skip_consensus_peaks)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Test available aligners (bowtie2)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Test available aligners (bowtie2)
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/