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Elevate lineage XEC as clade 24F
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This commit elevates Pango lineage XEC as clade 24F
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trvrb committed Sep 26, 2024
1 parent 41e2e8f commit 5c838b1
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Showing 5 changed files with 9 additions and 1 deletion.
1 change: 1 addition & 0 deletions defaults/clade_display_names.yml
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Expand Up @@ -43,3 +43,4 @@
24C: 24C (KP.3)
24D: 24D (XDV.1)
24E: 24E (KP.3.1.1)
24F: 24F (XEC)
3 changes: 2 additions & 1 deletion defaults/clade_emergence_dates.tsv
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Expand Up @@ -44,4 +44,5 @@ Nextstrain_clade first_sequence
24B 2023-11-01
24C 2023-12-01
24D 2024-01-01
24E 2023-12-01
24E 2023-12-01
24F 2024-06-01
1 change: 1 addition & 0 deletions defaults/clade_hierarchy.tsv
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Expand Up @@ -43,3 +43,4 @@ clade parent WHO
24C 24B Omicron
24D 21L Omicron
24E 24C Omicron
24F 24C Omicron
4 changes: 4 additions & 0 deletions defaults/clades.tsv
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Expand Up @@ -244,3 +244,7 @@ clade gene site alt
24E nuc 13121 T
24E nuc 15372 T
24E nuc 19722 G

24F clade 24C
24F nuc 2060 A

1 change: 1 addition & 0 deletions defaults/color_ordering.tsv
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Expand Up @@ -34043,6 +34043,7 @@ clade_membership 24B (JN.1.11.1)
clade_membership 24C (KP.3)
clade_membership 24D (XDV.1)
clade_membership 24E (KP.3.1.1)
clade_membership 24F (XEC)

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