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Merge pull request #1080 from nextstrain/remove-augur-recursion-limit #870

Merge pull request #1080 from nextstrain/remove-augur-recursion-limit

Merge pull request #1080 from nextstrain/remove-augur-recursion-limit #870

Workflow file for this run

name: CI
on:
- push
- pull_request
jobs:
test-build:
uses: nextstrain/.github/.github/workflows/pathogen-repo-ci.yaml@master
with:
build-args: all_regions -j 2 --profile nextstrain_profiles/nextstrain-ci
test-cram:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
- uses: actions/setup-python@v3
with:
python-version: "3.9"
- run: pip install cram nextstrain-augur
- run: cram --shell=/bin/bash tests/sanitize-metadata.t
docs:
uses: nextstrain/.github/.github/workflows/docs-ci.yaml@master
with:
docs-directory: docs/
environment-file: docs/conda.yml