Initial Release
Pre-release
Pre-release
- Created inital framework to collaborate using nf-core and Nextflow
- Made Gitbook documentation
- Formalize PR
- Formalize linting
- Add container documentation
- Testing pushing image to Jfrog
- Following modules added:
- Mutect1
- Polysolver
- GBCMS
- facets
- snppileup
- gatk4/applybqsr
- custom/splitfastqbylane
What's Changed
- Subworkflows/bam generation using nfcore with nextflow initialization by @anoronh4 in #6
- Nf test/gbcms by @buehlere in #10
- Feature/gbcms by @buehlere in #3
- added polysolver modules with nf-test by @anoronh4 in #12
- add gatk4/applybqsr by @anoronh4 in #14
- add custom/splitfastqbylane module by @anoronh4 in #23
- Includes module and tests for mutect1 by @rnaidu in #32
- Feature: add sync meta yml gitbook by @huyu335 in #25
- Module:snppileup by @nikhil in #24
- Update snppileup input description by @nikhil in #45
- Add Facets module by @nikhil in #34
- Feature/prs by @buehlere in #33
- adding new linting schema by @buehlere in #36
- remove bwa_markdup_bqsr subworkflow by @anoronh4 in #62
- Update gitbook sync by @huyu335 in #55
New Contributors
- @anoronh4 made their first contribution in #6
- @buehlere made their first contribution in #10
- @rnaidu made their first contribution in #32
- @huyu335 made their first contribution in #25
Full Changelog: https://github.com/mskcc-omics-workflows/modules/commits/0.1.0