Merge pull request #391 from monarch-initiative/bioregistry-reqs

Add dependency: bioregistry

python-requirements-apple-silicon.txt

@@ -1,10 +1,12 @@
 airium==0.2.6
+annotated-types==0.6.0
 antlr4-python3-runtime==4.9.3
 appdirs==1.4.4
 attrs==23.1.0
 Babel==2.13.1
 bcp47==0.0.4
 beautifulsoup4==4.12.2
+bioregistry==0.10.110
 cachetools==5.3.2
 cattrs==23.2.2
 certifi==2023.11.17
@@ -13,7 +15,7 @@ charset-normalizer==3.3.2
 class-resolver==0.4.2
 click==8.1.7
 colorama==0.4.6
-curies==0.6.7
+curies==0.7.4
 Deprecated==1.2.14
 deprecation==2.1.0
 distlib==0.3.7
@@ -38,7 +40,7 @@ jsonasobj2==1.0.4
 jsonschema==4.20.0
 jsonschema-specifications==2023.11.1
 kgcl-rdflib==0.5.0
-kgcl-schema==0.6.0
+kgcl_schema==0.6.2
 lark==1.1.8
 linkml-renderer==0.3.0
 linkml-runtime==1.6.2
@@ -54,7 +56,7 @@ more-click==0.1.2
 ndex2==3.6.0
 networkx==3.2.1
 numpy==1.26.2
-oaklib==0.5.22
+oaklib==0.5.25
 ols-client==0.1.4
 ontoportal-client==0.0.4
 packaging==23.2
@@ -66,9 +68,10 @@ pbr==6.0.0
 platformdirs==4.0.0
 pluggy==1.3.0
 prefixcommons==0.1.12
-prefixmaps==0.1.7
+prefixmaps==0.2.1
 pronto==2.5.5
-pydantic==1.10.13
+pydantic==2.5.3
+pydantic_core==2.14.6
 Pygments==2.17.2
 PyJSG==0.11.10
 pymdown-extensions==10.5
@@ -103,7 +106,7 @@ soupsieve==2.5
 SPARQLWrapper==2.0.0
 SQLAlchemy==2.0.23
 SQLAlchemy-Utils==0.38.3
-sssom==0.3.41
+sssom==0.4.2
 sssom-schema==0.15.0
 stevedore==5.1.0
 tabulate==0.9.0
@@ -117,7 +120,6 @@ urllib3==2.1.0
 validators==0.22.0
 virtualenv==20.24.7
 virtualenv-clone==0.5.7
-virtualenvwrapper==4.8.4
 watchdog==3.0.0
 wrapt==1.16.0
 zipp==3.17.0

python-requirements-unlocked.txt

@@ -1,3 +1,4 @@
+bioregistry
 curies
 jinja2
 oaklib