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Merge pull request #411 from monarch-initiative/mondo-sssom-config
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Delete: Goal for mondo.sssom.config.yml
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joeflack4 authored Jan 31, 2024
2 parents 1fd0807 + 3647979 commit 8e97b94
Showing 1 changed file with 0 additions and 5 deletions.
5 changes: 0 additions & 5 deletions src/ontology/mondo-ingest.Makefile
Original file line number Diff line number Diff line change
Expand Up @@ -196,11 +196,6 @@ $(TMPDIR)/component-%.json: $(COMPONENTSDIR)/%.owl
$(ROBOT) convert -i $< -f json -o $@
.PRECIOUS: $(TMPDIR)/component-%.json

MONDO_SSSOM_CONFIG_URL=https://raw.githubusercontent.com/monarch-initiative/mondo/master/src/ontology/metadata/mondo.sssom.config.yml

metadata/mondo.sssom.config.yml:
wget $(MONDO_SSSOM_CONFIG_URL) -O $@

$(MAPPINGSDIR)/%.sssom.tsv: $(TMPDIR)/component-%.json metadata/mondo.sssom.config.yml
sssom parse $< -I obographs-json --prefix-map-mode merged -m metadata/mondo.sssom.config.yml -o $@
sssom sort $@ -o $@
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