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v0.4.0-rc1

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@hrshdhgd hrshdhgd released this 20 Nov 15:42
· 53 commits to master since this release
20a00be

What's Changed

  • September cleaning 1 by @cthoyt in #413
  • Standardize usage of oboInOwl data by @cthoyt in #414
  • Refactor SPARQL utilities to use curies.Converter by @cthoyt in #415
  • Add converter to MappingSetDocument and MappingSetDataFrame by @cthoyt in #417
  • Update testing and type checking by @cthoyt in #418
  • Better handle URI fields when getting prefixes from metadata by @cthoyt in #420
  • Use curies.Converter in OntoPortal exporter by @cthoyt in #416
  • Use curies.Converter in Metadata object by @cthoyt in #421
  • Fix ORCID URI prefixes in test data by @cthoyt in #423
  • Improve MSDF instantiation and context functions by @cthoyt in #422
  • Update context loading by @cthoyt in #425
  • Remove needless output during tests by @cthoyt in #428
  • Re-implement reconciliation code with curies by @cthoyt in #426
  • Switch MSDF to use curies.Converter natively by @cthoyt in #430
  • Simplify parsing SSSOM w/ curies.chain by @cthoyt in #431
  • Explicitly use Python engine for pandas by @cthoyt in #435
  • Cache schema object by @cthoyt in #443
  • Standardize MSDF by @cthoyt in #438
  • Be less draconian on alignment api parsing by @matentzn in #437
  • Make MSDF with default converter by @cthoyt in #444
  • Get MSDF from LinkML objects by @cthoyt in #440
  • Remove "None" checks for df and metadata by @cthoyt in #442
  • Rename type hint for Converters by @cthoyt in #445
  • Remove duplicate definition of schema constant by @cthoyt in #446
  • Test old versions of Pandas by @hrshdhgd in #433
  • Refactor SSSOM Schema usage by @cthoyt in #449
  • Refactor mapping code by @cthoyt in #450
  • Added setuptools install to poetry and latest version of poetry by @hrshdhgd in #451
  • Consolidate mapping metadata setting by @cthoyt in #455
  • Refactor _extract_global_metadata() by @cthoyt in #452
  • Directly unpack metadata tuple by @cthoyt in #453
  • Cleanup Metadata usages by @cthoyt in #447
  • Improve CURIE and IRI validation by @cthoyt in #459
  • Update type hints for prefix map merging by @cthoyt in #454
  • Clean up extract_iri functionality by @cthoyt in #460
  • Upstream processing ambiguous URI or CURIE by @cthoyt in #463
  • Update SSSOM Extended Prefix Map by @github-actions in #466
  • Fix test after EPM update by @matentzn in #468
  • Optimization of some functions by @hrshdhgd in #462

New Contributors

  • @github-actions made their first contribution in #466

Full Changelog: v0.3.41...v0.4.0-rc1