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Update validation data files (#541)
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I remove all the current validation files, and replace them by new ones.
This is a first step in building a better test suite to monitor subtle
serialisation changes across SSSOM versions.

The updated files are generated by running the `update_validate_data.sh`
script.
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matentzn authored Jun 24, 2024
1 parent 5502067 commit fcb79b7
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Showing 26 changed files with 31,763 additions and 275,050 deletions.
609 changes: 304 additions & 305 deletions poetry.lock

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12 changes: 12 additions & 0 deletions tests/update_validate_data.sh
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set -e

poetry run sssom convert data/basic.tsv -O json -o validate_data/basic.tsv.json
poetry run sssom convert data/basic.tsv -O owl -o validate_data/basic.tsv.owl
poetry run sssom convert data/basic.tsv -O rdf -o validate_data/basic.tsv.rdf
poetry run sssom convert data/basic.tsv -O tsv -o validate_data/basic.tsv.tsv
poetry run sssom convert data/cob-to-external.tsv -O json -o validate_data/cob-to-external.tsv.json
poetry run sssom convert data/cob-to-external.tsv -O owl -o validate_data/cob-to-external.tsv.owl
poetry run sssom convert data/cob-to-external.tsv -O rdf -o validate_data/cob-to-external.tsv.rdf
poetry run sssom convert data/cob-to-external.tsv -O tsv -o validate_data/cob-to-external.tsv.tsv
poetry run sssom parse data/hp-base.json -I obographs-json -o validate_data/hp-base.json.tsv
poetry run sssom parse data/oaei-ordo-hp.rdf -I alignment-api-xml -o validate_data/oaei-ordo-hp.rdf.tsv
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