Skip to content

Issues: loculus-project/loculus

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort

Issues list

Refactor link styling code on Error box refactoring Code requires refactoring website Tasks related to the web application
#3025 opened Oct 18, 2024 by corneliusroemer
Fix layout shift when going from 0 to 1 selected checkbox bug Something isn't working website Tasks related to the web application
#3024 opened Oct 18, 2024 by corneliusroemer
Flaky E2E test: "pages/review/index.spec.ts:53:5 › The review page › approve restricted sequences" codesmell For warnings/lints without immediate harm but to be fixed eventually e2e E2E test related tests Test related issues
#3018 opened Oct 17, 2024 by corneliusroemer
CCHF: make alignment conditions less strict ingest Ingest pipeline
#2987 opened Oct 10, 2024 by anna-parker
feat(preprocessing): Require formatted author list deposition related to ENA/INSDC deposition discussion Open questions ingest Ingest pipeline preprocessing Issues related to the preprocessing component
#2985 opened Oct 10, 2024 by anna-parker
Improve biosample field mapping deposition related to ENA/INSDC deposition
#2984 opened Oct 10, 2024 by anna-parker
Improve assembly field mapping deposition related to ENA/INSDC deposition
#2983 opened Oct 10, 2024 by anna-parker
Prepro README out of date re how to run via docker documentation Improvements or additions to documentation preprocessing Issues related to the preprocessing component
#2974 opened Oct 8, 2024 by corneliusroemer
Prepro: Add tests for alignment/ sequence processing preprocessing Issues related to the preprocessing component tests Test related issues
#2972 opened Oct 8, 2024 by anna-parker
Store submissions files in submission db for better observability deposition related to ENA/INSDC deposition feature Feature proposal
#2961 opened Oct 7, 2024 by corneliusroemer
Add plausible script for loculus.org (the docs, not the loculus instance) deployment Code changes targetting the deployment infrastructure feature Feature proposal
#2952 opened Oct 4, 2024 by corneliusroemer
Submit NCBI release date in external metadata as well deposition related to ENA/INSDC deposition feature Feature proposal
#2950 opened Oct 4, 2024 by corneliusroemer
We should inform users in the group form that "Institution" will be used as ENA center name feature Feature proposal website Tasks related to the web application
#2949 opened Oct 4, 2024 by corneliusroemer
Allow groups to add their papers in which they first published/describe their sequences backend related to the loculus backend component deposition related to ENA/INSDC deposition discussion Open questions feature Feature proposal ingest Ingest pipeline website Tasks related to the web application
#2948 opened Oct 4, 2024 by corneliusroemer
Browse/search page navigations are not added to the browser history bug Something isn't working website Tasks related to the web application
#2942 opened Oct 3, 2024 by chaoran-chen
Propagate group edits to ENA projects deposition related to ENA/INSDC deposition feature Feature proposal
#2939 opened Oct 3, 2024 by corneliusroemer
The download button has no tooltip on sequence view modal feature Feature proposal website Tasks related to the web application
#2936 opened Oct 2, 2024 by JonasKellerer
Resize "All versions" dropdown on sequence view modal website Tasks related to the web application
#2935 opened Oct 2, 2024 by JonasKellerer
Unify casing of config values across preprocessing and ingest config Configuration related issues, i.e. helm processing deployment Code changes targetting the deployment infrastructure ingest Ingest pipeline preprocessing Issues related to the preprocessing component
#2933 opened Oct 2, 2024 by fengelniederhammer
Astro build lint: circular dependency codesmell For warnings/lints without immediate harm but to be fixed eventually website Tasks related to the web application
#2930 opened Oct 2, 2024 by corneliusroemer
Refactor backend tests to allow parallelization backend related to the loculus backend component feature Feature proposal tests Test related issues
#2924 opened Oct 1, 2024 by corneliusroemer
Backend fasta parser does not treat fasta headers with spaces correctly (according to spec) backend related to the loculus backend component bug Something isn't working
#2923 opened Oct 1, 2024 by corneliusroemer
ProTip! Find all open issues with in progress development work with linked:pr.