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lifewatch · Jan 27, 2023 · 5f93cf4 · 5f93cf4
1 parent 816c1b0
commit 5f93cf4
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Showing 4 changed files with 2,321 additions and 515 deletions.
diff --git a/0_download_data.ipynb b/0_download_data.ipynb
@@ -15,7 +15,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 7,
+   "execution_count": 1,
    "metadata": {
     "pycharm": {
      "name": "#%%\n"

diff --git a/1_add_env_data.ipynb b/1_add_env_data.ipynb
@@ -90,13 +90,14 @@
     "# Install the required packages. Geopandas can give problems in Windows machines, so better to install them using wheels when using Windows\n",
     "import sys\n",
     "!{sys.executable} -m pip install shapely==1.8.2\n",
+    "!{sys.executable} -m pip install git+https://github.com/paulfvliz/erddapy@localfile-fix\n",
     "!{sys.executable} -m pip install bpnsdata\n",
     "!{sys.executable} -m pip install pygeos"
    ]
   },
   {
    "cell_type": "code",
-   "execution_count": 2,
+   "execution_count": 1,
    "metadata": {
     "pycharm": {
      "is_executing": true,
@@ -111,6 +112,13 @@
       "C:\\Users\\cleap\\Envs\\sound-data-utils\\lib\\site-packages\\geopandas\\_compat.py:123: UserWarning: The Shapely GEOS version (3.10.2-CAPI-1.16.0) is incompatible with the GEOS version PyGEOS was compiled with (3.10.1-CAPI-1.16.0). Conversions between both will be slow.\n",
       "  warnings.warn(\n"
      ]
+    },
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "1.2.1\n"
+     ]
     }
    ],
    "source": [
@@ -124,7 +132,10 @@
     "import xarray\n",
     "from tqdm import tqdm\n",
     "\n",
-    "import bpnsdata"
+    "import bpnsdata\n",
+    "\n",
+    "import erddapy \n",
+    "print(erddapy.__version__)"
    ]
   },
   {
@@ -383,14 +394,13 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "outputs": [],
-   "source": [],
    "metadata": {
-    "collapsed": false,
     "pycharm": {
      "name": "#%%\n"
     }
-   }
+   },
+   "outputs": [],
+   "source": []
   },
   {
    "cell_type": "code",
@@ -421,4 +431,4 @@
  },
  "nbformat": 4,
  "nbformat_minor": 4
-}
+}
diff --git a/2_prepare_data.ipynb b/2_prepare_data.ipynb
@@ -17,7 +17,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 12,
+   "execution_count": 1,
    "metadata": {
     "jupyter": {
      "outputs_hidden": false
@@ -44,7 +44,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 13,
+   "execution_count": 2,
    "metadata": {
     "jupyter": {
      "outputs_hidden": false
@@ -53,7 +53,16 @@
      "name": "#%%\n"
     }
    },
-   "outputs": [],
+   "outputs": [
+    {
+     "name": "stderr",
+     "output_type": "stream",
+     "text": [
+      "C:\\Users\\cleap\\Envs\\sound-data-utils\\lib\\site-packages\\geopandas\\_compat.py:123: UserWarning: The Shapely GEOS version (3.10.2-CAPI-1.16.0) is incompatible with the GEOS version PyGEOS was compiled with (3.10.1-CAPI-1.16.0). Conversions between both will be slow.\n",
+      "  warnings.warn(\n"
+     ]
+    }
+   ],
    "source": [
     "import datetime\n",
     "import pathlib\n",
@@ -67,7 +76,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 14,
+   "execution_count": 3,
    "metadata": {
     "jupyter": {
      "outputs_hidden": false
@@ -85,7 +94,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 15,
+   "execution_count": 4,
    "metadata": {
     "jupyter": {
      "outputs_hidden": false
@@ -102,7 +111,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 16,
+   "execution_count": 5,
    "metadata": {
     "jupyter": {
      "outputs_hidden": false
@@ -146,7 +155,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 17,
+   "execution_count": 6,
    "metadata": {
     "jupyter": {
      "outputs_hidden": false
@@ -191,7 +200,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 18,
+   "execution_count": 7,
    "metadata": {
     "jupyter": {
      "outputs_hidden": false
@@ -210,7 +219,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 19,
+   "execution_count": 8,
    "metadata": {
     "jupyter": {
      "outputs_hidden": false